CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0043s0011
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0043s0011
T264603_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0043s0011.1.p
mTERF
88
296
LSLLRRHGFTGSQISTIITEYPKLLLADAEKSLGPKLQFLQSRGASSSELTQIVSSVPEILGKRGHKTISVYYDFVKETLLDKSSKYEKLCHSFPQGNLENKIRNVSVLRELGVPHRSLFSLLLSDRQPVCGKEKFEETLKKVVEMGFDPTTGKFVEALQVIYGMSEKTIEEKVNLYKRLGFDVGDVWASFKKCPVALRVTEKKMSDSI
Cagra.0043s0011.1.p
mTERF
278
395
FKKCPVALRVTEKKMSDSIKTFLGLGFSRDEFAMMVKNFPPCIGLSAEMVKRKADFLVKKMNWTLKALVSNPSVLGYSLEKRIVPRCNVIKVLISKGLIGSKVPPMSSVLAYTNQEFL
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART10G16610
Oryza barthii
OBART10G16610
N
OGLUM10G16680
Oryza glumaepatula
OGLUM10G16680
N
ONIVA10G18390
Oryza nivara
ONIVA10G18390
N
ORUFI10G17720
Oryza rufipogon
ORUFI10G17720
N