CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.3527s0013
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.3527s0013
T264634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3527s0013.1.p
mTERF
37
197
AQQAITDYLHTTRSLSYTHAEHIASNASVSVRNLILKLDFSVPTFSKSLRKHLSYHPINEFVFFFESIGIDYNEVSEFLPQKKFFFYEDRSVLDAACALSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGEL
Cagra.3527s0013.1.p
mTERF
135
351
LSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGELGSEIRCLFVMLRRLFDEFYSHHVFEENVDSLHAISRKIRVFYDLGCDNIEMWELMGINKSLFVEYSEEALMRKVEYFCRFGVRKEDVALLILRNPAIMDFDLDKPVFSVTGMLKHFGLSQDEVDAVAQKYPYVIGRNKLKNLPHVLRALDLQER
Cagra.3527s0013.1.p
mTERF
331
420
IGRNKLKNLPHVLRALDLQERIFDRLMNGNHHLLASYSLMDPKEDLDREYQEGLEELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQH
Cagra.3527s0013.1.p
mTERF
385
530
EELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQHVHGTAIELQERFQILLNNGVIFSKTCMLIRLAPKILNQKPHSIQDKLRFLCGEMGSSLEYLESFPAYLLFDLDNRINPRFRFHKWLVEKGLSEKSYSVASMVATSEKAFI
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018572
Ailuropoda melanoleuca
ENSAMEG00000018572
N
MTERF2
Canis familiaris
ENSCAFG00000001799
N
ENSCSAG00000018941
Chlorocebus sabaeus
ENSCSAG00000018941
N
MTERF2
Dasypus novemcinctus
ENSDNOG00000014382
N
MTERF2
Equus caballus
ENSECAG00000014795
N
MTERF2
Erinaceus europaeus
ENSEEUG00000004810
N
MTERF2
Felis catus
ENSFCAG00000030683
N
ENSP00000376575
Macaca fascicularis
ENSP00000376575
N
MTERF2
Macaca mulatta
ENSMMUG00000022278
N
ENSMPUG00000020039
Mustela putorius furo
ENSMPUG00000020039
N
MTERF2
Myotis lucifugus
ENSMLUG00000016281
N
MTERF2
Oryctolagus cuniculus
ENSOCUG00000009560
N
ENSOARG00000018491
Ovis aries
ENSOARG00000018491
N
ENSPANG00000006958
Papio anubis
ENSPANG00000006958
N
MTERF2
Pteropus vampyrus
ENSPVAG00000005869
N
ENSSSCG00000000165
Sus scrofa
ENSSSCG00000000165
N