CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021842m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10021842m.g
T264665_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021842m
mTERF
32
273
RILVHTNQSHYRKRILLADLLQRYGFPPSSLQHFLSRNSHLLNSDLTETETSLGVLLSLKLPQKSLVSLICDCPNVLRSEFLRKWRVPLSECGKQGVAPSAFKSVLEHSSRIGIGPDKFYECLRVLKGLGFCDSTVSRILSAFPGVLLVNEVEIRRKIEFLVGIDIALDNVERFFHVFPEILGIGTETRLKPLLDEFMKMGFSKDDVKKDIAREPRVLGLELGELPRCLELINTLKCREVIR
Carubv10021842m
mTERF
285
392
GFQVKLRVDCLCKYGLIHRDAFKVVWKEPRVILYEIEDIEKKIVFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNL
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.3288s0060
Boechera stricta
Bostr.3288s0060
N
0.723
Cagra.3132s0004
Capsella grandiflora
Cagra.3132s0004
N
0.961
Thhalv10018549m.g
Eutrema salsugineum
Thhalv10018549m.g
N
0.800