CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021881m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10021881m.g
T264666_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021881m
mTERF
85
430
LSLLRINGFTDSQISSIVTTYPRLLILDAEKSVAPKLKFLQSRGASSSELTEIVSSVPELLGKKWGKTVSRYYDFIKEVLEADKSFKFEKLCHSLPEGSSRQDNKIRNVLVLRDLGVPQKFLFSLLTSAGQPVCGKDKFEESLRKIVEMGFDPTTPKFVQALHVFYQTNDKKIEEKVNVYKGLGFAVEDVWAMFKKWPYCLKYSEDKISHTFETLKMYGMNEDEVRQVLKKYPQFVRISEQKILNFIETCLGLGFSRDEFVMIVKCFPMCLGLSVETVKKKTEFVVKKMNWQLKDITLFPPVLGYSLEKRIVPRCNVIKALMSKGLLPSELPSMAAVLSSADDDFL
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_960136
Branchiostoma floridae
estExt_fgenesh2_pg.C_960136
N
fgenesh2_pg.scaffold_72000003
Branchiostoma floridae
fgenesh2_pg.scaffold_72000003
N
fgenesh2_pg.scaffold_624000032
Branchiostoma floridae
fgenesh2_pg.scaffold_624000032
N
fgenesh2_pg.scaffold_58000023
Branchiostoma floridae
fgenesh2_pg.scaffold_58000023
N
fgenesh2_pg.scaffold_55000124
Branchiostoma floridae
fgenesh2_pg.scaffold_55000124
N
fgenesh2_pg.scaffold_55000119
Branchiostoma floridae
fgenesh2_pg.scaffold_55000119
N
fgenesh2_pg.scaffold_440000023
Branchiostoma floridae
fgenesh2_pg.scaffold_440000023
N
fgenesh2_pg.scaffold_354000015
Branchiostoma floridae
fgenesh2_pg.scaffold_354000015
N
fgenesh2_pg.scaffold_354000013
Branchiostoma floridae
fgenesh2_pg.scaffold_354000013
N
fgenesh2_pg.scaffold_32000086
Branchiostoma floridae
fgenesh2_pg.scaffold_32000086
N
fgenesh2_pg.scaffold_32000031
Branchiostoma floridae
fgenesh2_pg.scaffold_32000031
N
fgenesh2_pg.scaffold_308000052
Branchiostoma floridae
fgenesh2_pg.scaffold_308000052
N
fgenesh2_pg.scaffold_268000051
Branchiostoma floridae
fgenesh2_pg.scaffold_268000051
N
fgenesh2_pg.scaffold_1639000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1639000001
N
estExt_fgenesh2_pg.C_10050001
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050001
N
estExt_fgenesh2_pg.C_750143
Branchiostoma floridae
estExt_fgenesh2_pg.C_750143
N
estExt_fgenesh2_pg.C_7360007
Branchiostoma floridae
estExt_fgenesh2_pg.C_7360007
N
estExt_fgenesh2_pg.C_7160018
Branchiostoma floridae
estExt_fgenesh2_pg.C_7160018
N
estExt_fgenesh2_pg.C_5860001
Branchiostoma floridae
estExt_fgenesh2_pg.C_5860001
N
estExt_fgenesh2_pg.C_5580012
Branchiostoma floridae
estExt_fgenesh2_pg.C_5580012
N
estExt_fgenesh2_pg.C_520015
Branchiostoma floridae
estExt_fgenesh2_pg.C_520015
N
estExt_fgenesh2_pg.C_460129
Branchiostoma floridae
estExt_fgenesh2_pg.C_460129
N
estExt_fgenesh2_pg.C_2150032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2150032
N
estExt_fgenesh2_pg.C_1360008
Branchiostoma floridae
estExt_fgenesh2_pg.C_1360008
N
estExt_fgenesh2_pg.C_1010105
Branchiostoma floridae
estExt_fgenesh2_pg.C_1010105
N
estExt_fgenesh2_pg.C_10050003
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050003
N
estExt_fgenesh2_pg.C_10050002
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050002
N