CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene03554-v1.0-hybrid
(
Fragaria vesca
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
gene03554-v1.0-hybrid
T264781_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna03554.1-v1.0-hybrid
mTERF
166
256
LSEEIDMDEKWLPLIDYLSTFGFKESHFIQMYERHMPSLQINVCSAQERLEYLLSVGVKQRDIRRMVLRQPQILEYTVENNLKSHVAFLMN
mrna03554.1-v1.0-hybrid
mTERF
241
456
YTVENNLKSHVAFLMNLGIPSSRIGRIIAATPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVVQLSPQILVQRIDISWNARCTFLSNEIGAPRESIVKMVKKHPQFLHYSIDDGLLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDESF
Links
Other
mTERF
family TFs
Other
Fragaria vesca
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.255390
Cucumis sativus
Cucsa.255390
N
BGIOSGA022565
Oryza indica
BGIOSGA022565
N
OLONG_012883
Oryza longistaminata
OLONG_012883
N
OLONG_016286
Oryza longistaminata
OLONG_016286
N
OLONG_021588
Oryza longistaminata
OLONG_021588
N
30073.m002286
Ricinus communis
30073.m002286
N
30225.m001687
Ricinus communis
30225.m001687
N
PGSC0003DMG400017526
Solanum tuberosum
PGSC0003DMG400017526
N