RAX3 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Al_scaffold_0005_1808 T266110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.879 0.989
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.879 0.989
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0005_1808 Myb 14 62
Al_scaffold_0005_1808 Myb 68 113

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

484 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010513 Aedes aegypti AAEL010513 N
AALB008521 Anopheles albimanus AALB008521 N
AARA009954 Anopheles arabiensis AARA009954 N
AATE005610 Anopheles atroparvus AATE005610 N
ACHR005048 Anopheles christyi ACHR005048 N
ACOM034790 Anopheles coluzzii ACOM034790 N
ACUA011673 Anopheles culicifacies ACUA011673 N
ADIR006549 Anopheles dirus ADIR006549 N
AEPI004207 Anopheles epiroticus AEPI004207 N
AFAF005439 Anopheles farauti AFAF005439 N
AFUN010892 Anopheles funestus AFUN010892 N
AGAP003844 Anopheles gambiae AGAP003844 N
AMAM016105 Anopheles maculatus AMAM016105 N
AMEC021851 Anopheles melas AMEC021851 N
AMIN004071 Anopheles minimus AMIN004071 N
AQUA001375 Anopheles quadriannulatus AQUA001375 N
ASTEI00771 Anopheles stephensi ASTEI00771 N