BGIOSGA013620 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA013620 T266821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.821 0.872
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.813 0.872
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.813 0.872
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.813 0.872
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.813 0.872
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.813 0.872
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.813 0.872
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.803 0.894
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.803 0.894
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.772 0.851
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.767 0.872
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.767 0.872
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.742 0.851
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.742 0.851
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.742 0.851
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.732 0.830
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.709 0.830
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.709 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013620-PA Myb 226 277

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

361 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.00815.93.1 Aspergillus carbonarius e_gw1.00815.93.1 N 0.000
fgenesh1_pg.00082_#_23 Aspergillus carbonarius fgenesh1_pg.00082_#_23 N 0.000
CADANGAG00006610 Aspergillus niger CADANGAG00006610 N 0.000
CADANGAG00012412 Aspergillus niger CADANGAG00012412 N 0.000
CADANGAG00012414 Aspergillus niger CADANGAG00012414 N 0.000
CADAORAG00005662 Aspergillus oryzae CADAORAG00005662 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
M438DRAFT_99004 Aureobasidium pullulans M438DRAFT_99004 N 0.000
COCC4DRAFT_64454 Bipolaris maydis COCC4DRAFT_64454 N 0.000
PVAR5_1141 Byssochlamys spectabilis PVAR5_1141 N 0.000
CPAG_04042 Candida parapsilosis CPAG_04042 N 0.000
Z519_01238 Cladophialophora bantiana Z519_01238 N 0.000
Z519_03855 Cladophialophora bantiana Z519_03855 N 0.000
e_gw1.34.5.1 Cochliobolus heterostrophus C5 e_gw1.34.5.1 N 0.000
CFIO01_05805 Colletotrichum fioriniae CFIO01_05805 N 0.000
CGGC5_6888 Colletotrichum gloeosporioides CGGC5_6888 N 0.000
CGGC5_11092 Colletotrichum gloeosporioides CGGC5_11092 N 0.000
CH063_00115 Colletotrichum higginsianum CH063_00115 N 0.000
CH063_13215 Colletotrichum higginsianum CH063_13215 N 0.000
Cob_05129 Colletotrichum orbiculare Cob_05129 N 0.000
CSUB01_10231 Colletotrichum sublineola CSUB01_10231 N 0.000
HMPREF1541_00544 Cyphellophora europaea HMPREF1541_00544 N 0.000
HMPREF1541_08826 Cyphellophora europaea HMPREF1541_08826 N 0.000
A1O9_07021 Exophiala aquamarina A1O9_07021 N 0.000
A1O9_00991 Exophiala aquamarina A1O9_00991 N 0.000
HMPREF1120_04133 Exophiala dermatitidis HMPREF1120_04133 N 0.000
Z517_03162 Fonsecaea pedrosoi Z517_03162 N 0.000
Z517_00801 Fonsecaea pedrosoi Z517_00801 N 0.000
FOXG_02565 Fusarium oxysporum FOXG_02565 N 0.000
MANI_026073 Metarhizium anisopliae MANI_026073 N 0.000
MCYG_00717 Microsporum canis MCYG_00717 N 0.000
NFIA_059770 Neosartorya fischeri CADNFIAG00005104 N 0.000
OIDMADRAFT_97438 Oidiodendron maius OIDMADRAFT_97438 N 0.000
OIDMADRAFT_193465 Oidiodendron maius OIDMADRAFT_193465 N 0.000
PMAA_001430 Penicillium marneffei PMAA_001430 N 0.000
Z518_05741 Rhinocladiella mackenziei Z518_05741 N 0.000
Z518_08432 Rhinocladiella mackenziei Z518_08432 N 0.000
SBOR_2893 Sclerotinia borealis SBOR_2893 N 0.000
SS1G_02247 Sclerotinia sclerotiorum SS1G_02247 N 0.000
PMAA_001430 Talaromyces marneffei PMAA_001430 N 0.000