Bo3g002960 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g002960 T267202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.903 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g002960.1 Myb 3 51
Bo3g002960.1 Myb 95 142

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_008210 Acremonium chrysogenum ACRE_008210 N
F775_22367 Aegilops tauschii F775_22367 N
ENSAMEG00000013019 Ailuropoda melanoleuca ENSAMEG00000013019 N
ANCCAN_16550 Ancylostoma caninum ANCCAN_16550 N
ACOM023832 Anopheles coluzzii ACOM023832 N
ACEP25970 Atta cephalotes ACEP25970 N
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N
BOTBODRAFT_182015 Botryobasidium botryosum BOTBODRAFT_182015 N
Bo4g012540 Brassica oleracea Bo4g012540 N
Bra015737 Brassica rapa Bra015737 N
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N
Aan_R005479 Calypte anna Aan_R005479 N
Cflo_11029--XP_001120115.1_APIME Camponotus floridanus Cflo_11029--XP_001120115.1_APIME N
CapteG108943 Capitella teleta CapteG108943 N
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N
GG.C169_S05_00378 Chlorella vulgaris GG.C169_S05_00378 N
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N
YQE_11989 Dendroctonus ponderosae YQE_11989 N
GL12242 Drosophila persimilis FBgn0149849 N
GD20218 Drosophila simulans FBgn0191696 N
GK21672 Drosophila willistoni FBgn0223657 N
GK25519 Drosophila willistoni FBgn0227478 N
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N
Gfo_R015467 Geospiza fortis Gfo_R015467 N
HCOI00647600 Haemonchus contortus HCOI00647600 N
HHAL003716-PA Halyomorpha halys HHAL003716-PA N
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N
HPBE_0000220801 Heligmosomoides bakeri HPBE_0000220801 N
Genemark.397_g Heterobasidion annosum Genemark.397_g N
MLOC_7381 Hordeum vulgare MLOC_7381 N
Lus10008531.g Linum usitatissimum Lus10008531.g N
MESCA003685 Megaselia scalaris MESCA003685 N
MCINX010724 Melitaea cinxia MCINX010724 N
ARID5A Microcebus murinus ENSMICG00000001964 I
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N
Myotis_brandtii_Arid3c_10010321 Myotis brandtii Myotis_brandtii_Arid3c_10010321 N
Myotis_brandtii_KDM5D_10002268 Myotis brandtii Myotis_brandtii_KDM5D_10002268 N
NECAME_01264 Necator americanus NECAME_01264 N
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N
OS06G0622300 Oryza sativa OS06G0622300 I
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N
Pavir.J25952 Panicum virgatum Pavir.J25952 N
PHUM027610 Pediculus humanus PHUM027610 N
PHACADRAFT_251691 Phanerochaete carnosa PHACADRAFT_251691 N
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N
Solyc12g038740.1 Solanum lycopersicum Solyc12g038740.1 N
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N
PGSC0003DMG401018896 Solanum tuberosum PGSC0003DMG401018896 N
ARID5A Sorex araneus ENSSARG00000003004 I
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N
SPU_009801 Strongylocentrotus purpuratus SPU_009801 N
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N
TELCIR_22728 Teladorsagia circumcincta TELCIR_22728 N
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N
Traes_2AS_40ED2C7BC Triticum aestivum Traes_2AS_40ED2C7BC N
TRIUR3_29596 Triticum urartu TRIUR3_29596 N
ARID5B Tursiops truncatus ENSTTRG00000009968 N