Bo3g018460 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g018460 T267220_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.872 0.968
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.872 0.968
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.750 0.849
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.750 0.849
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.681 0.828
AT5G05790
M07119_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g05790_col_a 		0.677 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g018460.1 Myb 141 188

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010859 Ailuropoda melanoleuca ENSAMEG00000010859 I
ENSBTAP00000031798-D1 Bos grunniens ENSBTAP00000031798-D1 I
AIRE Bos taurus ENSBTAG00000023393 I
AIRE Canis familiaris ENSCAFG00000010724 I
AIRE Cavia porcellus ENSCPOG00000019868 I
ENSCSAG00000007836 Chlorocebus sabaeus ENSCSAG00000007836 I
Aire Dipodomys ordii ENSDORG00000004132 I
AIRE Equus caballus ENSECAG00000012924 I
AIRE Felis catus ENSFCAG00000007933 I
AIRE Gorilla gorilla ENSGGOG00000005672 I
AIRE Homo sapiens ENSG00000160224 D
ENSSTOG00000023870 Ictidomys tridecemlineatus ENSSTOG00000023870 I
AIRE Loxodonta africana ENSLAFG00000008582 I
ENSMMUP00000005576 Macaca fascicularis ENSMMUP00000005576 I
AIRE Monodelphis domestica ENSMODG00000011425 I
ENSMPUG00000010031 Mustela putorius furo ENSMPUG00000010031 I
Aire Mus musculus ENSMUSG00000000731 D
Myotis_brandtii_Aire_10004050 Myotis brandtii Myotis_brandtii_Aire_10004050 I
ENSMLUG00000010968 Myotis lucifugus ENSMLUG00000010968 I
AIRE Ochotona princeps ENSOPRG00000000050 I
AIRE Otolemur garnettii ENSOGAG00000010769 I
ENSOARG00000011819 Ovis aries ENSOARG00000011819 I
AIRE Pan troglodytes ENSPTRG00000013974 I
ENSPANG00000020902 Papio anubis ENSPANG00000020902 I
ENSPPYG00000011482 Pongo abelii ENSPPYG00000011482 I
AIRE Procavia capensis ENSPCAG00000007455 I
AIRE Pteropus vampyrus ENSPVAG00000011010 I
Aire Rattus norvegicus ENSRNOG00000001213 I
AIRE Tupaia belangeri ENSTBEG00000016828 I
AIRE Tursiops truncatus ENSTTRG00000010417 I