Bo6g122640 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo6g122640 T267462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.854 0.914
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.854 0.914
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.726 0.774
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.726 0.774
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.726 0.774
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.726 0.774
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.722 0.785
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.722 0.785
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.691 0.720
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.691 0.720
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.683 0.742
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.683 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g122640.1 Myb 16 63
Bo6g122640.1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I 0.000
Alligator_sinensis_CCG003524.1 Alligator sinensis Alligator_sinensis_CCG003524.1 I 0.000
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I 0.000
MYCN Anolis carolinensis ENSACAG00000011351 I 0.000
Afo_R015728 Aptenodytes forsteri Afo_R015728 I 0.000
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I 0.000
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I 0.000
Brh_R011889 Buceros rhinoceros Brh_R011889 I 0.000
Aan_R015370 Calypte anna Aan_R015370 I 0.000
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I 0.000
MYCN Cavia porcellus ENSCPOG00000020263 I 0.000
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I 0.000
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I 0.000
MYCN Dasypus novemcinctus ENSDNOG00000047342 I 0.000
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I 0.000
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I 0.000
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I 0.000
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I 0.000
MYCN Gallus gallus ENSGALG00000016462 I 0.000
MYCN Gorilla gorilla ENSGGOG00000005130 I 0.000
MYCN Homo sapiens ENSG00000134323 D 0.000
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I 0.000
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I 0.000
MYCN Loxodonta africana ENSLAFG00000015181 I 0.000
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I 0.000
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I 0.000
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I 0.000
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I 0.000
MYCN Microcebus murinus ENSMICG00000013903 I 0.000
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I 0.000
Mycn Mus musculus ENSMUSG00000037169 D 0.000
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I 0.000
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I 0.000
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I 0.000
MYCN Ochotona princeps ENSOPRG00000004369 I 0.000
Ogr12112 Ophisaurus gracilis Ogr12112 I 0.000
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I 0.000
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I 0.000
MYCN Otolemur garnettii ENSOGAG00000010927 I 0.000
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I 0.000
MYCN Pan troglodytes ENSPTRG00000011672 I 0.000
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I 0.000
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I 0.000
Pvit_07093 Pogona vitticeps Pvit_07093 I 0.000
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I 0.000
MYCN Pteropus vampyrus ENSPVAG00000010355 I 0.000
Mycn Rattus norvegicus ENSRNOG00000051372 I 0.000
MYCN Sus scrofa ENSSSCG00000008618 I 0.000
MYCN Taeniopygia guttata ENSTGUG00000013104 I 0.000
Tal_R000146 Tyto alba Tal_R000146 I 0.000
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I 0.000