Bra008705 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra008705 T267802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.886 0.968
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.776 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.776 0.785
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.752 0.785
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.752 0.785
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.736 0.720
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.736 0.720
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.718 0.763
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.718 0.763
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.704 0.796
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.704 0.796
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.675 0.742
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.666 0.710
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.666 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008705.1-P Myb 14 61
Bra008705.1-P Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

638 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001127.1 Alligator sinensis Alligator_sinensis_CCG001127.1 I
Alligator_sinensis_CCG005858.1 Alligator sinensis Alligator_sinensis_CCG005858.1 I
ANCCAN_17433 Ancylostoma caninum ANCCAN_17433 I
ANCCEY_02814 Ancylostoma ceylanicum ANCCEY_02814 I
ANCCEY_14629 Ancylostoma ceylanicum ANCCEY_14629 I
ANCDUO_03053 Ancylostoma duodenale ANCDUO_03053 I
ANCDUO_20982 Ancylostoma duodenale ANCDUO_20982 I
ANCDUO_25190 Ancylostoma duodenale ANCDUO_25190 I
ASIM_0000264801 Anisakis simplex ASIM_0000264801 I
ASIM_0001461601 Anisakis simplex ASIM_0001461601 I
AARA005669 Anopheles arabiensis AARA005669 I
AMAM002408 Anopheles maculatus AMAM002408 I
AMAM023294 Anopheles maculatus AMAM023294 I
AMIN011055 Anopheles minimus AMIN011055 I
BGLB012440 Biomphalaria glabrata BGLB012440 I
BGIBMGA001714 Bombyx mori BGIBMGA001714 I
BGIBMGA003939 Bombyx mori BGIBMGA003939 I
Bm5683 Brugia malayi Bm5683 I
BTMF_0000163201 Brugia timori BTMF_0000163201 I
ERF Callithrix jacchus ENSCJAG00000012822 I
ELF1 Callithrix jacchus ENSCJAG00000017782 I
ENSCHOG00000011634 Choloepus hoffmanni ENSCHOG00000011634 I
CGI_10000136 Crassostrea gigas CGI_10000136 I
CGI_10011697 Crassostrea gigas CGI_10011697 I
CGI_10011699 Crassostrea gigas CGI_10011699 I
CGOC_0000212501 Cylicostephanus goldi CGOC_0000212501 I
CGOC_0000700501 Cylicostephanus goldi CGOC_0000700501 I
KGM_04984 Danaus plexippus KGM_04984 I
ENSDNOG00000034553 Dasypus novemcinctus ENSDNOG00000034553 I
YQE_05461 Dendroctonus ponderosae YQE_05461 I
DICVIV_06455 Dictyocaulus viviparus DICVIV_06455 I
DICVIV_12912 Dictyocaulus viviparus DICVIV_12912 I
DILT_0000398501 Diphyllobothrium latum DILT_0000398501 I
Elf4 Dipodomys ordii ENSDORG00000014956 I
ENSDORG00000015174 Dipodomys ordii ENSDORG00000015174 I
ECPE_0000832401 Echinostoma caproni ECPE_0000832401 I
ETV5 Erinaceus europaeus ENSEEUG00000003754 I
ETV6 Erinaceus europaeus ENSEEUG00000013089 I
ETS2 Erinaceus europaeus ENSEEUG00000015949 I
ENSGMOG00000005395 Gadus morhua ENSGMOG00000005395 I
etv1 Gasterosteus aculeatus ENSGACG00000012802 I
ETV2 Gorilla gorilla ENSGGOG00000009978 I
ENSGGOG00000022492 Gorilla gorilla ENSGGOG00000022492 I
Hba_08310 Heterorhabditis bacteriophora Hba_08310 I
ERF Homo sapiens ENSG00000105722 D
ELF1 Homo sapiens ENSG00000120690 D
ETV6 Homo sapiens ENSG00000139083 D
ENSSTOG00000010509 Ictidomys tridecemlineatus ENSSTOG00000010509 I
ENSLACG00000006078 Latimeria chalumnae ENSLACG00000006078 I
LOAG_09309 Loa loa LOAG_09309 I
ENSMEUG00000006389 Macropus eugenii ENSMEUG00000006389 I
FLI1 Microcebus murinus ENSMICG00000016730 N
ML46087a Mnemiopsis leidyi ML46087a I
Fev Mus musculus ENSMUSG00000055197 D
NEMVEDRAFT_v1g201692 Nematostella vectensis NEMVEDRAFT_v1g201692 I
OESDEN_01353 Oesophagostomum dentatum OESDEN_01353 I
OESDEN_16524 Oesophagostomum dentatum OESDEN_16524 I
ENSOCUG00000021953 Oryctolagus cuniculus ENSOCUG00000021953 I
ENSPSIG00000014193 Pelodiscus sinensis ENSPSIG00000014193 I
PPAI005463 Phlebotomus papatasi PPAI005463 I
ENSPFOG00000008185 Poecilia formosa ENSPFOG00000008185 I
SPDEF Procavia capensis ENSPCAG00000000551 N
ETV5 Procavia capensis ENSPCAG00000011636 I
ELF1 Procavia capensis ENSPCAG00000013981 I
PXEA_0003657701 Protopolystoma xenopodis PXEA_0003657701 I
SCUD_0001589201 Schistosoma curassoni SCUD_0001589201 I
SCUD_0001741701 Schistosoma curassoni SCUD_0001741701 I
SROB_0001733701 Schistosoma rodhaini SROB_0001733701 I
SMU15031575 Schmidtea mediterranea SMU15031575 I
SINV18588 Solenopsis invicta SINV18588 I
SPER_0001543201 Spirometra erinaceieuropaei SPER_0001543201 I
SPER_0001929301 Spirometra erinaceieuropaei SPER_0001929301 I
SPER_0002229601 Spirometra erinaceieuropaei SPER_0002229601 I
SPER_0002289501 Spirometra erinaceieuropaei SPER_0002289501 I
SPER_0002333601 Spirometra erinaceieuropaei SPER_0002333601 I
SPER_0002447201 Spirometra erinaceieuropaei SPER_0002447201 I
L596_g12359 Steinernema carpocapsae L596_g12359 I
L596_g92 Steinernema carpocapsae L596_g92 I
L889_g29916 Steinernema feltiae L889_g29916 I
L898_g6107 Steinernema monticolum L898_g6107 I
ELF2 Sus scrofa ENSSSCG00000029920 I
SMUV_0000898501 Syphacia muris SMUV_0000898501 I
ENSTGUG00000006059 Taeniopygia guttata ENSTGUG00000006059 I
ENSTRUG00000004604 Takifugu rubripes ENSTRUG00000004604 I
ENSTRUG00000006311 Takifugu rubripes ENSTRUG00000006311 I
ENSTRUG00000007244 Takifugu rubripes ENSTRUG00000007244 I
ENSTSYG00000011393 Tarsius syrichta ENSTSYG00000011393 N
TELCIR_12432 Teladorsagia circumcincta TELCIR_12432 I
TELCIR_20449 Teladorsagia circumcincta TELCIR_20449 I
TELCIR_21777 Teladorsagia circumcincta TELCIR_21777 I
ENSTNIG00000006987 Tetraodon nigroviridis ENSTNIG00000006987 I
TCLT_0000333001 Thelazia callipaeda TCLT_0000333001 I
TCNE_0001894301 Toxocara canis TCNE_0001894301 I
ETV7 Tupaia belangeri ENSTBEG00000000299 I
ENSTBEG00000001919 Tupaia belangeri ENSTBEG00000001919 I
GABPA Tupaia belangeri ENSTBEG00000002362 I
ETV6 Tupaia belangeri ENSTBEG00000004004 I
ENSTBEG00000008569 Tupaia belangeri ENSTBEG00000008569 I
ETV1 Tupaia belangeri ENSTBEG00000014625 N
SPDEF Tupaia belangeri ENSTBEG00000015013 N
ETS2 Vicugna pacos ENSVPAG00000002062 I
ELF2 Vicugna pacos ENSVPAG00000003668 I
ENSVPAG00000006558 Vicugna pacos ENSVPAG00000006558 I
ENSXMAG00000018944 Xiphophorus maculatus ENSXMAG00000018944 I