Bra008875 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra008875 T267806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.909 0.978
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.909 0.978
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.803 0.828
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.803 0.828
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.803 0.828
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.695 0.763
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.695 0.763
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.695 0.763
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.693 0.753
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.693 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008875.1-P Myb 20 67
Bra008875.1-P Myb 73 118

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

470 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_047960 Acremonium chrysogenum ACRE_047960 I
MCYG_07778 Arthroderma otae MCYG_07778 N
fgenesh1_pm.00168_#_532 Aspergillus carbonarius fgenesh1_pm.00168_#_532 I
ACLA_057300 Aspergillus clavatus CADACLAG00005493 I
CADAFLAG00013329 Aspergillus flavus CADAFLAG00013329 I
AFUA_8G03970 Aspergillus fumigatus CADAFUAG00003044 I
ANIA_01406 Aspergillus nidulans CADANIAG00008016 I
EURHEDRAFT_454510 Aspergillus ruber EURHEDRAFT_454510 I
BBA_05317 Beauveria bassiana BBA_05317 I
BDDG_04662 Blastomyces dermatitidis BDDG_04662 I
Bcin05g07400 Botrytis cinerea Bcin05g07400 D
PVAR5_1235 Byssochlamys spectabilis PVAR5_1235 I
CTHT_0054920 Chaetomium thermophilum CTHT_0054920 I
CCM_07661 Cordyceps militaris CCM_07661 I
estExt_fgenesh1_pg.C_40812 Cryphonectria parasitica estExt_fgenesh1_pg.C_40812 I
H072_5123 Dactylellina haptotyla H072_5123 I
DRE_06035 Drechslerella stenobrocha DRE_06035 I
FFUJ_04086 Fusarium fujikuroi FFUJ_04086 I
FGRRES_17192 Fusarium graminearum FGRRES_17192 I
FOXG_05918 Fusarium oxysporum FOXG_05918 I
FPSE_09716 Fusarium pseudograminearum FPSE_09716 I
NechaG31542 Fusarium solani NechaG31542 I
FVEG_03789 Fusarium verticillioides FVEG_03789 I
GGTG_00966 Gaeumannomyces graminis GGTG_00966 I
HCBG_04788 Histoplasma capsulatum HCBG_04788 I
MGG_17060 Magnaporthe oryzae MGG_17060 I
MAPG_07711 Magnaporthe poae MAPG_07711 I
MBM_03422 Marssonina brunnea MBM_03422 I
MAC_06599 Metarhizium acridum MAC_06599 I
MAM_07569 Metarhizium album MAM_07569 I
MANI_121568 Metarhizium anisopliae MANI_121568 I
MBR_08632 Metarhizium brunneum MBR_08632 I
MGU_07934 Metarhizium guizhouense MGU_07934 I
MAJ_09934 Metarhizium majus MAJ_09934 I
X797_008205 Metarhizium robertsii X797_008205 I
MCYG_07778 Microsporum canis MCYG_07778 N
MYCTH_2295212 Myceliophthora thermophila MYCTH_2295212 I
e_gw1.1.1349.1 Nectria haematococca e_gw1.1.1349.1 I
NFIA_096670 Neosartorya fischeri CADNFIAG00009220 I
NCU02576 Neurospora crassa NCU02576 D
estExt_fgenesh2_pg.C_20614 Neurospora discreta estExt_fgenesh2_pg.C_20614 I
NEUTE1DRAFT_73358 Neurospora tetrasperma NEUTE1DRAFT_73358 I
OIDMADRAFT_43859 Oidiodendron maius OIDMADRAFT_43859 I
PABG_00345 Paracoccidioides brasiliensis PABG_00345 I
PAAG_07780 Paracoccidioides sp lutzii PAAG_07780 I
Pc22g10180 Penicillium chrysogenum Pc22g10180 I
PEX1_034110 Penicillium expansum PEX1_034110 I
PITC_007110 Penicillium italicum PITC_007110 I
PMAA_060350 Penicillium marneffei PMAA_060350 I
PDE_00983 Penicillium oxalicum PDE_00983 I
PCH_Pc22g10180 Penicillium rubens PCH_Pc22g10180 I
U727_00431300241 Penicillium solitum U727_00431300241 I
PODANS_1_8960 Podospora anserina PODANS_1_8960 I
GMDG_00720 Pseudogymnoascus destructans GMDG_00720 I
V499_02224 Pseudogymnoascus pannorum V499_02224 I
SAPIO_CDS5525 Scedosporium apiospermum SAPIO_CDS5525 I
SBOR_8563 Sclerotinia borealis SBOR_8563 I
SS1G_12158 Sclerotinia sclerotiorum SS1G_12158 I
SETTUDRAFT_160027 Setosphaeria turcica SETTUDRAFT_160027 I
SMAC_05786 Sordaria macrospora SMAC_05786 I
S40288_06487 Stachybotrys chartarum S40288_06487 I
S40285_06932 Stachybotrys chlorohalonata S40285_06932 I
PMAA_060350 Talaromyces marneffei PMAA_060350 I
TSTA_011180 Talaromyces stipitatus TSTA_011180 I
THITE_2122040 Thielavia terrestris THITE_2122040 I
VHEMI03709 Torrubiella hemipterigena VHEMI03709 I
TRIATDRAFT_323311 Trichoderma atroviride TRIATDRAFT_323311 I
TRIREDRAFT_108940 Trichoderma reesei TRIREDRAFT_108940 I
TRIVIDRAFT_85198 Trichoderma virens TRIVIDRAFT_85198 I
GSTUM_00008737001 Tuber melanosporum GSTUM_00008737001 I
UV8b_6694 Ustilaginoidea virens UV8b_6694 I