Bra013346 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra013346 T267860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.884 0.989
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.884 0.989
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013346.1-P Myb 221 267
Bra013346.1-P Myb 273 318

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
H311_02629 Anncaliia algerae H311_02629 N 0.000
G210_4239 Candida maltosa G210_4239 I 0.000
EDEG_00254 Edhazardia aedis EDEG_00254 N 0.000
CAD26113 Encephalitozoon cuniculi CAD26113 N 0.000
EHEL_111920 Encephalitozoon hellem EHEL_111920 N 0.000
Eint_111930 Encephalitozoon intestinalis Eint_111930 N 0.000
EROM_111920 Encephalitozoon romaleae EROM_111920 N 0.000
EBI_24318 Enterocytozoon bieneusi EBI_24318 N 0.000
gw1.6.1266.1 Mucor circinelloides gw1.6.1266.1 N 0.000
gw1.4.1763.1 Mucor circinelloides gw1.4.1763.1 N 0.000
NEPG_00691 Nematocida parisii ertm1 NEPG_00691 N 0.000
NERG_00041 Nematocida sp NERG_00041 N 0.000
NBO_40g0005 Nosema bombycis NBO_40g0005 N 0.000
NBO_1248g0001 Nosema bombycis NBO_1248g0001 N 0.000
NCER_101028 Nosema ceranae NCER_101028 N 0.000
SERLA73DRAFT_17521 Serpula lacrymans SERLA73DRAFT_17521 N 0.000
SLOPH_1962 Spraguea lophii SLOPH_1962 N 0.000
THOM_2765 Trachipleistophora hominis THOM_2765 N 0.000
VCUG_02591 Vavraia culicis VCUG_02591 N 0.000
VICG_01897 Vittaforma corneae VICG_01897 N 0.000