BRADI1G29680 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI1G29680 T268173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.854 0.913
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.854 0.913
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.854 0.913
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.854 0.913
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.854 0.913
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.839 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.839 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.812 0.826
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.800 0.870
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.766 0.783
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.766 0.783
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.724 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.724 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.724 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G29680.1 Myb 66 111
BRADI1G29680.2 Myb 33 78

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006227 Ailuropoda melanoleuca ENSAMEG00000006227 I 0.000
ENSBTAP00000000066-D1 Bos grunniens ENSBTAP00000000066-D1 I 0.000
PRDM14 Bos taurus ENSBTAG00000000060 I 0.000
PRDM14 Callithrix jacchus ENSCJAG00000008052 I 0.000
PRDM14 Canis familiaris ENSCAFG00000007696 I 0.000
PRDM14 Cavia porcellus ENSCPOG00000027176 I 0.000
ENSCSAG00000013856 Chlorocebus sabaeus ENSCSAG00000013856 I 0.000
ENSDNOG00000014500 Dasypus novemcinctus ENSDNOG00000014500 I 0.000
ENSFCAG00000001436 Felis catus ENSFCAG00000001436 I 0.000
PRDM14 Gorilla gorilla ENSGGOG00000011363 I 0.000
PRDM14 Homo sapiens ENSG00000147596 D 0.000
ENSP00000276594 Macaca fascicularis ENSP00000276594 I 0.000
ENSMMUG00000014191 Macaca mulatta ENSMMUG00000014191 I 0.000
ENSMPUG00000010629 Mustela putorius furo ENSMPUG00000010629 I 0.000
ENSOARG00000003528 Ovis aries ENSOARG00000003528 I 0.000
PRDM14 Pan troglodytes ENSPTRG00000020331 I 0.000
ENSPANG00000024378 Papio anubis ENSPANG00000024378 I 0.000
ENSPPYG00000018658 Pongo abelii ENSPPYG00000018658 I 0.000
ENSTSYG00000010610 Tarsius syrichta ENSTSYG00000010610 I 0.000