GLYMA01G02070 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA01G02070 T271208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.782 0.785
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.782 0.785
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.767 0.839
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.767 0.839
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.753 0.828
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.753 0.828
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.742 0.763
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.704 0.720
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.692 0.688
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.692 0.688
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.692 0.688
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.692 0.688
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.678 0.817
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.666 0.796
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.666 0.796
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.662 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G02070.2 Myb 15 62
GLYMA01G02070.2 Myb 68 113

Links

Other Myb/SANT family TFs
Other Glycine max TFs

799 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00010p00267100 Amborella trichopoda AMTR_s00010p00267100 I 0.742
ATMYB16 Arabidopsis lyrata fgenesh2_kg.6__1513__AT5G15310.1 I 0.742
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I 0.742
MYB106 Arabidopsis thaliana AT3G01140 D 0.742
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.742
Bostr.2902s0269 Boechera stricta Bostr.2902s0269 I 0.742
Bo5g156410 Brassica oleracea Bo5g156410 I 0.742
Bo9g164230 Brassica oleracea Bo9g164230 I 0.742
Bo3g010230 Brassica oleracea Bo3g010230 I 0.725
Bra008705 Brassica rapa Bra008705 I 0.742
Bra023515 Brassica rapa Bra023515 I 0.725
Bra039142 Brassica rapa Bra039142 I 0.742
PK22137.1 Cannabis sativa PK22137.1 I 0.742
Cagra.1036s0022 Capsella grandiflora Cagra.1036s0022 I 0.742
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.742
Carubv10013887m.g Capsella rubella Carubv10013887m.g I 0.742
Carubv10001433m.g Capsella rubella Carubv10001433m.g I 0.742
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I 0.742
Ca_27606 Cicer arietinum Ca_27606 I 0.732
Ca_22367 Cicer arietinum Ca_22367 I 0.742
Ca_10504 Cicer arietinum Ca_10504 I 0.742
Cla010483 Citrullus lanatus Cla010483 I 0.730
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I 0.742
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I 0.742
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.730
Eucgr.J01362 Eucalyptus grandis Eucgr.J01362 I 0.742
Thhalv10014101m.g Eutrema salsugineum Thhalv10014101m.g I 0.742
gene04423-v1.0-hybrid Fragaria vesca gene04423-v1.0-hybrid I 0.742
GLYMA20G04240 Glycine max GLYMA20G04240 I 0.729
GLYMA19G02890 Glycine max GLYMA19G02890 I 0.752
GLYMA18G49630 Glycine max GLYMA18G49630 I 0.742
GLYMA13G05550 Glycine max GLYMA13G05550 I 0.742
GLYMA09G37040 Glycine max GLYMA09G37040 I 0.742
GLYMA07G35561 Glycine max GLYMA07G35561 I 0.729
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.742
LPERR08G12960 Leersia perrieri LPERR08G12960 I 0.742
Lus10033003.g Linum usitatissimum Lus10033003.g I 0.742
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I 0.742
MDP0000742771 Malus domestica MDP0000742771 I 0.742
MDP0000278681 Malus domestica MDP0000278681 I 0.742
MDP0000274301 Malus domestica MDP0000274301 I 0.742
MDP0000121476 Malus domestica MDP0000121476 I 0.742
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I 0.742
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I 0.730
MTR_6g012690 Medicago truncatula MTR_6g012690 I 0.722
OBART08G15700 Oryza barthii OBART08G15700 I 0.742
OB08G23170 Oryza brachyantha OB08G23170 I 0.742
ORGLA08G0137800 Oryza glaberrima ORGLA08G0137800 I 0.742
OGLUM08G16450 Oryza glumaepatula OGLUM08G16450 I 0.742
BGIOSGA026935 Oryza indica BGIOSGA026935 I 0.742
OLONG_004507 Oryza longistaminata OLONG_004507 I 0.742
OMERI08G12990 Oryza meridionalis OMERI08G12990 I 0.742
ONIVA08G16810 Oryza nivara ONIVA08G16810 I 0.742
OPUNC08G13770 Oryza punctata OPUNC08G13770 I 0.742
ORUFI08G17610 Oryza rufipogon ORUFI08G17610 I 0.742
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.742
Pavir.J33881 Panicum virgatum Pavir.J33881 I 0.742
POPTR_0008s08870 Populus trichocarpa POPTR_0008s08870 I 0.742
POPTR_0010s17300 Populus trichocarpa POPTR_0010s17300 I 0.731
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I 0.742
Pm015916 Prunus mume Pm015916 I 0.742
Pm006464 Prunus mume Pm006464 I 0.742
PRUPE_ppa006769mg Prunus persica PRUPE_ppa006769mg I 0.742
SapurV1A.0801s0120 Salix purpurea SapurV1A.0801s0120 I 0.742
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I 0.742
SapurV1A.0063s0570 Salix purpurea SapurV1A.0063s0570 I 0.731
Si013994m.g Setaria italica Si013994m.g I 0.742
Solyc02g088190.2 Solanum lycopersicum Solyc02g088190.2 I 0.722
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I 0.742
TCM_011659 Theobroma cacao TCM_011659 I 0.730
TCM_018639 Theobroma cacao TCM_018639 I 0.742
VIT_14s0108g01080 Vitis vinifera VIT_14s0108g01080 I 0.742
VIT_01s0026g02770 Vitis vinifera VIT_01s0026g02770 I 0.726
GRMZM2G079123 Zea mays GRMZM2G079123 I 0.742