CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA03G19470
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA03G19470
T271282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.672
0.764
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA03G19470.2
Myb
57
103
RGGWTEEDDDTLTNAVQVFNGKNWKKIAEFLPGKSEVQCLHRWQKVL
GLYMA03G19470.2
Myb
109
155
KGPWTQEEDDKIIEMVSTHGPKKWSLISKSLPGRIGKQCRERWCNHL
GLYMA03G19470.2
Myb
161
206
KDPWTQEEELALMDAHRIHGNKWAEIAKVLHGRTDNSIKNHWNSSL
GLYMA03G19470.3
Myb
57
103
RGGWTEEDDDTLTNAVQVFNGKNWKKIAEFLPGKSEVQCLHRWQKVL
GLYMA03G19470.3
Myb
109
163
KGPWTQEEDDKIIEMVSTHGPKKWSLISKSLPGRIGKQCRERTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_05762
Arthroderma benhamiae
ARB_05762
N
0.000
ACLA_094570
Aspergillus clavatus
CADACLAG00008883
I
0.000
AFUA_2G01260
Aspergillus fumigatus
CADAFUAG00003544
I
0.000
EURHEDRAFT_518478
Aspergillus ruber
EURHEDRAFT_518478
I
0.000
BDDG_09480
Blastomyces dermatitidis
BDDG_09480
I
0.000
CIMG_00161
Coccidioides immitis
CIMG_00161
N
0.000
CPC735_059830
Coccidioides posadasii
CPC735_059830
N
0.000
HCBG_04402
Histoplasma capsulatum
HCBG_04402
I
0.000
MCYG_00180
Microsporum canis
MCYG_00180
N
0.000
MGYG_00747
Microsporum gypseum
MGYG_00747
N
0.000
NFIA_033560
Neosartorya fischeri
CADNFIAG00003609
I
0.000
Pc20g05880
Penicillium chrysogenum
Pc20g05880
N
0.000
PCH_Pc20g05880
Penicillium rubens
PCH_Pc20g05880
N
0.000
TEQG_02573
Trichophyton equinum
TEQG_02573
N
0.000
H101_06801
Trichophyton interdigitale
H101_06801
N
0.000
H102_08016
Trichophyton rubrum
H102_08016
N
0.000
H105_08042
Trichophyton soudanense
H105_08042
N
0.000
TESG_02135
Trichophyton tonsurans
TESG_02135
N
0.000
TRV_04480
Trichophyton verrucosum
TRV_04480
N
0.000
UREG_00256
Uncinocarpus reesii
UREG_00256
N
0.000