CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GRMZM2G017268 *(Zea mays)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GRMZM2G017268	T271893_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.821	0.828
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.821	0.828
AtMYB93 M07020_2.00	Arabidopsis thaliana	HDNYYYAMCWAMYHHHHHHHH	DDDDDDDDRKTWGKTRRRNHD	Dap-seq OMalley et al.(2016) MYB93_col_a	0.789	0.871
AtMYB93 M07021_2.00	Arabidopsis thaliana	NNHNBYYYAMCWAMY	RKTWGKTRRRVNDNN	Dap-seq OMalley et al.(2016) MYB93_colamp_a	0.789	0.871
MYB106 M11040_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT3G01140_01	0.769	0.785
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.764	0.785
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.764	0.785
AtMYB17 M07099_2.00	Arabidopsis thaliana	YYYACCWACCWHHHH	DDDDWGGTWGGTRRR	Dap-seq OMalley et al.(2016) MYB17_colamp_a	0.701	0.742
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.701	0.699
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.701	0.699
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.701	0.699
PK28187.1 M01286_2.00	Cannabis sativa	TACCTACC	GGTAGGTA	PBM Lambert et al.(2019) pTH11305	0.669	0.785
AtMYB41 M07109_2.00	Arabidopsis thaliana	DHDBBYYACCTAMYW	WRKTAGGTRRVVHDH	Dap-seq OMalley et al.(2016) MYB41_col_a	0.669	0.763
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.667	0.753
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.667	0.753
AtMYB10 M07081_2.00	Arabidopsis thaliana	YYYACCWAMCHHHHNH	DNDDDDGKTWGGTRRR	Dap-seq OMalley et al.(2016) MYB10_col_a	0.661	0.699
AtMYB10 M07082_2.00	Arabidopsis thaliana	NYYYACCWAMCHHH	DDDGKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB10_colamp_a	0.661	0.699
MYB58 M07005_2.00	Arabidopsis thaliana	NNYYYACCWAMCHHH	DDDGKTWGGTRRRNN	Dap-seq OMalley et al.(2016) MYB58_col_a	0.661	0.688
MYB58 M07006_2.00	Arabidopsis thaliana	HNNYHYACCWAMCHHHNNNNH	DNNNNDDDGKTWGGTRDRNND	Dap-seq OMalley et al.(2016) MYB58_colamp_a	0.661	0.688
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GRMZM2G017268_P01	Myb	14	61	KGPWTQEEDEKLLHYIQKNGHGSWRTLPRLAGLNRCGKSCRLRWTNYL
GRMZM2G017268_P01	Myb	67	112	RGKFSQEEEQTILHLHSVLGNKWSAIATHLPGRTDNEIKNFWNTHL
GRMZM2G017268_P02	Myb	14	61	KGPWTQEEDEKLLHYIQKNGHGSWRTLPRLAGLNRCGKSCRLRWTNYL
GRMZM2G017268_P02	Myb	67	112	RGKFSQEEEQTILHLHSVLGNKWSAIATHLPGRTDNEIKNFWNTHL

Links
Other Myb/SANT family TFs
Other *Zea mays* TFs

832 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CADAORAG00005645	Aspergillus oryzae	CADAORAG00005645	N
PV06_09580	Exophiala oligosperma	PV06_09580	N
FFUJ_12646	Fusarium fujikuroi	FFUJ_12646	N
FOXG_14525	Fusarium oxysporum	FOXG_14525	N
FVEG_13367	Fusarium verticillioides	FVEG_13367	N

GRMZM2G017268 (Zea mays) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

832 Related TFs

GRMZM2G017268 **(Zea mays)
Myb/SANT**