CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GRMZM2G145041 *(Zea mays)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GRMZM2G145041	T272075_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK08316.1 M02350_2.00	Cannabis sativa	NNNRWATCNN	NNGATWYNNN	PBM Weirauch et al.(2014) pTH9488	0.849	0.891
RVE7 M01069_2.00	Arabidopsis thaliana	NDHRWATCNN	NNGATWYDHN	PBM Sullivan et al.(2014) pTH7081	0.805	0.891
RVE7 M02286_2.00	Arabidopsis thaliana	NDARTATCH	DGATAYTHN	PBM Weirauch et al.(2014) pTH7277	0.805	0.891
RVE7L M07071_2.00	Arabidopsis thaliana	NNNNWAAATATCWNN	NNWGATATTTWNNNN	Dap-seq OMalley et al.(2016) AT3G10113_col_a	0.805	0.891
RVE7 M07008_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) EPR1_colamp_a	0.805	0.891
RVE7 M07009_2.00	Arabidopsis thaliana	NWAAATATCTHN	NDAGATATTTWN	Dap-seq OMalley et al.(2016) EPR1_col	0.805	0.891
RVE1 M00879_2.00	Arabidopsis thaliana	AAATATCT	AGATATTT	PBM Franco-Zorrilla et al.(2014) RVE1	0.773	0.804
RVE1 M07128_2.00	Arabidopsis thaliana	NNNWAAATATCTNN	NNAGATATTTWNNN	Dap-seq OMalley et al.(2016) RVE1_col_a	0.773	0.804
RVE1 M07129_2.00	Arabidopsis thaliana	NNWAATATCW	WGATATTWNN	Dap-seq OMalley et al.(2016) RVE1_colamp_a	0.773	0.804
LHY M06997_2.00	Arabidopsis thaliana	NWAAATATCT	AGATATTTWN	Dap-seq OMalley et al.(2016) LHY1_col_a	0.772	0.804
LHY M06998_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LHY1_colamp_a	0.772	0.804
OS08G0157600 M02330_2.00	Oryza sativa	DNRTATCHN	NDGATAYNH	PBM Weirauch et al.(2014) pTH7793	0.763	0.804
CCA1 M00875_2.00	Arabidopsis thaliana	NDNRWATCN	NGATWYNHN	PBM Franco-Zorrilla et al.(2014) CCA1	0.717	0.761
CCA1 M11039_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CCA1_Q5	0.717	0.761
RVE6 M01081_2.00	Arabidopsis thaliana	AATATCTD	HAGATATT	PBM Sullivan et al.(2014) pTH7151	0.689	0.652
RVE6 M07138_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At5g52660_col_a	0.689	0.652
RVE6 M07139_2.00	Arabidopsis thaliana	NNNWAAATATCT	AGATATTTWNNN	Dap-seq OMalley et al.(2016) At5g52660_colamp_a	0.689	0.652
RVE5 M01079_2.00	Arabidopsis thaliana	NWAATATCHN	NDGATATTWN	PBM Sullivan et al.(2014) pTH7138	0.686	0.630
RVE5 M07100_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At4g01280_col_a	0.686	0.630
RVE5 M07101_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At4g01280_colamp_a	0.686	0.630
RVE8 M01074_2.00	Arabidopsis thaliana	NNNRWATCNN	NNGATWYNNN	PBM Sullivan et al.(2014) pTH7136	0.679	0.652
RVE8 M07069_2.00	Arabidopsis thaliana	NHNWAAATATCT	AGATATTTWNDN	Dap-seq OMalley et al.(2016) At3g09600_col_a	0.679	0.652
RVE8 M07070_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At3g09600_colamp_a	0.679	0.652
PK02532.1 M02347_2.00	Cannabis sativa	WAATATCTN	NAGATATTW	PBM Weirauch et al.(2014) pTH9579	0.679	0.630
RVE4 M07117_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LCL1_colamp_a	0.679	0.630
RVE4 M07118_2.00	Arabidopsis thaliana	NAAAATATCT	AGATATTTTN	Dap-seq OMalley et al.(2016) LCL1_col	0.679	0.630
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GRMZM2G145041_P01	Myb	59	104	REKWTEEEHGKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFF
GRMZM2G145041_P02	Myb	59	87	REKWTEEEHGKFLEALKLYGRSWRQIQGA

Links
Other Myb/SANT family TFs
Other *Zea mays* TFs

458 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGOS_ACR209W	Ashbya gossypii	AGOS_ACR209W	N	0.000
M437DRAFT_57903	Aureobasidium melanogenum	M437DRAFT_57903	N	0.000
M438DRAFT_314995	Aureobasidium pullulans	M438DRAFT_314995	N	0.000
AUEXF2481DRAFT_41260	Aureobasidium subglaciale	AUEXF2481DRAFT_41260	N	0.000
CaO19.13345	Candida albicans	CaO19.13345	N	0.000
CaO19.5924	Candida albicans	CaO19.5924	N	0.000
CD36_84590	Candida dubliniensis	CD36_84590	N	0.000
CLUG_03020	Candida lusitaniae	CLUG_03020	N	0.000
G210_4113	Candida maltosa	G210_4113	N	0.000
CORT_0C03980	Candida orthopsilosis	CORT_0C03980	N	0.000
CTRG_02481	Candida tropicalis	CTRG_02481	N	0.000
CLUG_03020	Clavispora lusitaniae	CLUG_03020	N	0.000
CNI01500	Cryptococcus neoformans	CNI01500	N	0.000
DEHA2G13574g	Debaryomyces hansenii	DEHA2G13574g	N	0.000
Ecym_4635	Eremothecium cymbalariae	Ecym_4635	N	0.000
PAS_chr3_0084	Komagataella pastoris	PAS_chr3_0084	N	0.000
KUCA_T00003666001	Kuraishia capsulata	KUCA_T00003666001	N	0.000
LALA0_S01e07184g	Lachancea lanzarotensis	LALA0_S01e07184g	N	0.000
LELG_02686	Lodderomyces elongisporus	LELG_02686	N	0.000
HPODL_04995	Ogataea parapolymorpha	HPODL_04995	N	0.000
XP_002492295.1	Pichia pastoris	XP_002492295.1	N	0.000
estExt_fgenesh1_pg.C_chr_1.20163	Pichia stipitis	estExt_fgenesh1_pg.C_chr_1.20163	N	0.000
GMDG_04760	Pseudogymnoascus destructans	GMDG_04760	I	0.000
AACERI_AaceriACR209W	Saccharomycetaceae sp ashbya aceri	AACERI_AaceriACR209W	N	0.000
PICST_66618	Scheffersomyces stipitis	PICST_66618	N	0.000
A1Q1_01025	Trichosporon asahii	A1Q1_01025	N	0.000
YALI0_F13695g	Yarrowia lipolytica	YALI0_F13695g	N	0.000

GRMZM2G145041 (Zea mays) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

458 Related TFs

GRMZM2G145041 **(Zea mays)
Myb/SANT**