CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR03G16640 *(Leersia perrieri)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	LPERR03G16640	T273692_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB30 M07089_2.00	Arabidopsis thaliana	NHHHCAACYACYWHH	DDWRGTRGTTGDDDN	Dap-seq OMalley et al.(2016) MYB30_col_a	0.805	0.871
MYB30 M07090_2.00	Arabidopsis thaliana	HHHYYHCCAACYAMY	RKTRGTTGGDRRDDD	Dap-seq OMalley et al.(2016) MYB30_colamp_a	0.805	0.871
MYB96 M07153_2.00	Arabidopsis thaliana	HHHHHYHHCCAACYAHYWNHN	NDNWRDTRGTTGGDDRDDDDD	Dap-seq OMalley et al.(2016) MYB96_colamp_a	0.805	0.871
MYB96 M07154_2.00	Arabidopsis thaliana	YAMCHNCCAMCHAHHHHH	DDDDDTDGKTGGNDGKTR	Dap-seq OMalley et al.(2016) MYB96_col_b	0.805	0.871
MYB94 M02298_2.00	Arabidopsis thaliana	DACCGGTH	DACCGGTH	PBM Weirauch et al.(2014) pTH7085	0.796	0.849
MYB94 M07094_2.00	Arabidopsis thaliana	HHNYHYCAACYACYWHHNN	NNDDWRGTRGTTGRDRNDD	Dap-seq OMalley et al.(2016) MYB94_col_b	0.796	0.849
MYB60 M07001_2.00	Arabidopsis thaliana	HNNHYYCAACYACYWHHNN	NNDDWRGTRGTTGRRDNND	Dap-seq OMalley et al.(2016) MYB60_col	0.794	0.839
ATY13 M07035_2.00	Arabidopsis thaliana	HAMCHMCCAMCHAHH	DDTDGKTGGKDGKTD	Dap-seq OMalley et al.(2016) ATY13_col_a	0.776	0.849
ATY13 M07036_2.00	Arabidopsis thaliana	HAMCHHCCAACHAHH	DDTDGTTGGDDGKTD	Dap-seq OMalley et al.(2016) ATY13_colamp_a	0.776	0.849
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR03G16640.1	Myb	14	61	KGPWTPEEDIILVSYVQEHGPGNWRAVPARTGLLRCSKSCRLRWTNYL
LPERR03G16640.1	Myb	67	112	RGGFSDHEERLIVHLQALLGNRWSAIASYLPHRTDNDIKNFWNTHL

Links
Other Myb/SANT family TFs
Other *Leersia perrieri* TFs

311 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CPIJ018236	Culex quinquefasciatus	CPIJ018236	N	0.000