MTR_2g067420 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_2g067420 T274735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.794 0.817
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.794 0.817
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.757 0.774
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.757 0.774
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.699 0.742
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.699 0.742
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.689 0.731
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.689 0.731
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.689 0.731
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.689 0.731
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.689 0.720
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.689 0.710
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.689 0.710
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.670 0.720
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.670 0.720
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.662 0.699
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.662 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH38294 Myb 16 63
KEH38294 Myb 69 114

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

537 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017605 Ailuropoda melanoleuca ENSAMEG00000017605 I
ENSP00000230732-D1 Bos grunniens ENSP00000230732-D1 I
POU4F3 Bos taurus ENSBTAG00000018817 I
POU4F3 Callithrix jacchus ENSCJAG00000021307 I
POU4F3 Canis familiaris ENSCAFG00000006473 I
POU4F3 Cavia porcellus ENSCPOG00000025610 I
Cmyd_10007016 Chelonia mydas Cmyd_10007016 I
ENSCSAG00000012256 Chlorocebus sabaeus ENSCSAG00000012256 I
POU4F3 Dasypus novemcinctus ENSDNOG00000045606 I
Pou4f3 Dipodomys ordii ENSDORG00000002965 I
POU4F3 Echinops telfairi ENSETEG00000006520 I
POU4F3 Equus caballus ENSECAG00000018410 I
POU4F3 Erinaceus europaeus ENSEEUG00000012660 I
POU4F3 Felis catus ENSFCAG00000030722 I
POU4F3 Gorilla gorilla ENSGGOG00000012435 I
POU4F3 Homo sapiens ENSG00000091010 D
ENSSTOG00000021302 Ictidomys tridecemlineatus ENSSTOG00000021302 I
ENSLACG00000008349 Latimeria chalumnae ENSLACG00000008349 I
POU4F3 Loxodonta africana ENSLAFG00000006932 I
ENSP00000230732 Macaca fascicularis ENSP00000230732 I
ENSMMUG00000022320 Macaca mulatta ENSMMUG00000022320 I
ENSMEUG00000009050 Macropus eugenii ENSMEUG00000009050 I
ENSMICG00000003274 Microcebus murinus ENSMICG00000003274 I
POU4F3 Monodelphis domestica ENSMODG00000010137 I
ENSMPUG00000007828 Mustela putorius furo ENSMPUG00000007828 I
Pou4f3 Mus musculus ENSMUSG00000024497 D
Myotis_brandtii_POU4F3_10017427 Myotis brandtii Myotis_brandtii_POU4F3_10017427 I
ENSNLEG00000009898 Nomascus leucogenys ENSNLEG00000009898 I
ENSOCUG00000022425 Oryctolagus cuniculus ENSOCUG00000022425 I
POU4F3 Otolemur garnettii ENSOGAG00000026756 I
ENSOARG00000003067 Ovis aries ENSOARG00000003067 I
POU4F3 Pan troglodytes ENSPTRG00000017374 I
ENSPANG00000008306 Papio anubis ENSPANG00000008306 I
ENSPSIG00000016096 Pelodiscus sinensis ENSPSIG00000016096 I
ENSPFOG00000003289 Poecilia formosa ENSPFOG00000003289 I
ENSPPYG00000015910 Pongo abelii ENSPPYG00000015910 I
POU4F3 Pteropus vampyrus ENSPVAG00000005224 I
Pou4f3 Rattus norvegicus ENSRNOG00000018842 I
ENSSHAG00000008089 Sarcophilus harrisii ENSSHAG00000008089 I
POU4F3 Tupaia belangeri ENSTBEG00000014805 I
POU4F3 Tursiops truncatus ENSTTRG00000000937 I
ENSXMAG00000001410 Xiphophorus maculatus ENSXMAG00000001410 I