OBART05G04370 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART05G04370 T275517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.748 0.696
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.748 0.696
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.723 0.696
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.723 0.696
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.715 0.696
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.664 0.696
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.664 0.696
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.664 0.696
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.664 0.696
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.664 0.674
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.664 0.674
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.664 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G04370.1 Myb 27 72

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I 0.000
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I 0.000
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I 0.000
Afo_R004723 Aptenodytes forsteri Afo_R004723 I 0.000
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I 0.000
PROX1 Bos taurus ENSBTAG00000010978 I 0.000
Brh_R001903 Buceros rhinoceros Brh_R001903 I 0.000
PROX1 Callithrix jacchus ENSCJAG00000015514 I 0.000
PROX1 Canis familiaris ENSCAFG00000012445 I 0.000
PROX1 Cavia porcellus ENSCPOG00000011987 I 0.000
Cmyd_10013042 Chelonia mydas Cmyd_10013042 I 0.000
PROX1 Equus caballus ENSECAG00000019220 I 0.000
PROX1 Felis catus ENSFCAG00000029702 I 0.000
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I 0.000
PROX1 Gallus gallus ENSGALG00000009791 I 0.000
Gfo_R010932 Geospiza fortis Gfo_R010932 I 0.000
PROX1 Gorilla gorilla ENSGGOG00000015130 I 0.000
PROX1 Homo sapiens ENSG00000117707 D 0.000
ENSP00000355925 Macaca fascicularis ENSP00000355925 I 0.000
PROX1 Macaca mulatta ENSMMUG00000011914 I 0.000
PROX1 Meleagris gallopavo ENSMGAG00000009635 I 0.000
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I 0.000
Prox1 Mus musculus ENSMUSG00000010175 I 0.000
PROX1 Myotis lucifugus ENSMLUG00000006993 I 0.000
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I 0.000
Ogr11789 Ophisaurus gracilis Ogr11789 I 0.000
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I 0.000
prox1a Oryzias latipes ENSORLG00000014947 I 0.000
PROX1 Otolemur garnettii ENSOGAG00000017025 I 0.000
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I 0.000
PROX1 Pan troglodytes ENSPTRG00000001974 I 0.000
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I 0.000
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I 0.000
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I 0.000
Pvit_00353 Pogona vitticeps Pvit_00353 I 0.000
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I 0.000
Prox1 Rattus norvegicus ENSRNOG00000003694 I 0.000
PROX1 Sus scrofa ENSSSCG00000015584 I 0.000
PROX1 Taeniopygia guttata ENSTGUG00000002974 I 0.000
Tal_R002989 Tyto alba Tal_R002989 I 0.000
prox1.L Xenopus laevis XB-GENE-485331 I 0.000