OGLUM08G16000 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM08G16000 T275800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.909 1.000
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.909 1.000
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.875 0.957
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.875 0.957
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.821 0.915
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G16000.1 Myb 263 314

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I
AMIN001735 Anopheles minimus AMIN001735 N
BGIBMGA006479 Bombyx mori BGIBMGA006479 N
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
estExt_fgenesh2_pg.C_1780033 Branchiostoma floridae estExt_fgenesh2_pg.C_1780033 N
fgenesh2_pg.scaffold_21000109 Branchiostoma floridae fgenesh2_pg.scaffold_21000109 N
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I
CGI_10009943 Crassostrea gigas CGI_10009943 N
CpipJ_CPIJ014669 Culex pipiens CpipJ_CPIJ014669 N
CPIJ014669 Culex quinquefasciatus CPIJ014669 N
ENSDNOG00000025505 Dasypus novemcinctus ENSDNOG00000025505 I
ENSDNOG00000046863 Dasypus novemcinctus ENSDNOG00000046863 I
B-H1 Drosophila ananassae FBgn0012114 N
DUXA Equus caballus ENSECAG00000021112 I
DUXA Felis catus ENSFCAG00000007545 I
DUXA Gorilla gorilla ENSGGOG00000005650 I
DUXA Homo sapiens ENSG00000258873 D
ENSLACG00000016556 Latimeria chalumnae ENSLACG00000016556 N
ENSMMUP00000010232 Macaca fascicularis ENSMMUP00000010232 I
DUXA Macaca mulatta ENSMMUG00000007788 I
ENSMEUG00000014608 Macropus eugenii ENSMEUG00000014608 N
DUXA Microcebus murinus ENSMICG00000006042 I
Myotis_brandtii_HOXD3_10035002 Myotis brandtii Myotis_brandtii_HOXD3_10035002 N
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I
DUXA Pan troglodytes ENSPTRG00000028871 I
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I
ENSTRUG00000009707 Takifugu rubripes ENSTRUG00000009707 I
ENSTRUG00000015941 Takifugu rubripes ENSTRUG00000015941 I
TTRE_0000025001 Trichuris trichiura TTRE_0000025001 N
DUXA Tursiops truncatus ENSTTRG00000014200 I