ORGLA02G0325900 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA02G0325900 T276679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.792 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.792 0.872
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.792 0.872
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.792 0.872
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.774 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA02G0325900.1 Myb 539 589

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000005749-D1 Bos grunniens ENSBTAP00000005749-D1 I 0.000
STAT2 Bos taurus ENSBTAG00000004380 I 0.000
ENSCJAG00000011101 Callithrix jacchus ENSCJAG00000011101 I 0.000
ENSCAFG00000000121 Canis familiaris ENSCAFG00000000121 I 0.000
ENSCAFG00000017707 Canis familiaris ENSCAFG00000017707 I 0.000
STAT2 Cavia porcellus ENSCPOG00000014930 I 0.000
ENSCSAG00000005161 Chlorocebus sabaeus ENSCSAG00000005161 I 0.000
STAT2 Equus caballus ENSECAG00000022326 I 0.000
STAT2 Felis catus ENSFCAG00000012023 I 0.000
STAT2 Gorilla gorilla ENSGGOG00000006127 I 0.000
STAT2 Homo sapiens ENSG00000170581 D 0.000
ENSSTOG00000015985 Ictidomys tridecemlineatus ENSSTOG00000015985 I 0.000
STAT2 Loxodonta africana ENSLAFG00000014890 I 0.000
ENSP00000315768 Macaca fascicularis ENSP00000315768 I 0.000
STAT2 Macaca mulatta ENSMMUG00000000803 I 0.000
ENSMPUG00000001431 Mustela putorius furo ENSMPUG00000001431 I 0.000
Myotis_brandtii_STAT2_10009187 Myotis brandtii Myotis_brandtii_STAT2_10009187 I 0.000
STAT2 Myotis lucifugus ENSMLUG00000006785 I 0.000
ENSNLEG00000017494 Nomascus leucogenys ENSNLEG00000017494 I 0.000
STAT2 Otolemur garnettii ENSOGAG00000001538 I 0.000
ENSOARG00000009154 Ovis aries ENSOARG00000009154 I 0.000
STAT2 Pan troglodytes ENSPTRG00000005095 I 0.000
ENSPANG00000012539 Papio anubis ENSPANG00000012539 I 0.000