ORGLA06G0168900 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA06G0168900 T276765_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.700 0.728
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.700 0.728
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.700 0.728
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.694 0.761
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.694 0.761
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.694 0.761
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.690 0.739
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.690 0.739
Q9FR42_TOBAC
M11076_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBAS1_01 		0.686 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0168900.1 Myb 247 294
ORGLA06G0168900.1 Myb 300 344

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007513 Ailuropoda melanoleuca ENSAMEG00000007513 I
Alligator_sinensis_CCG009030.1 Alligator sinensis Alligator_sinensis_CCG009030.1 I
ENSACAG00000003497 Anolis carolinensis ENSACAG00000003497 I
Afo_R007440 Aptenodytes forsteri Afo_R007440 I
ENSBTAP00000010016-D1 Bos grunniens ENSBTAP00000010016-D1 I
TERF2 Bos taurus ENSBTAG00000007617 I
TERF2 Callithrix jacchus ENSCJAG00000015339 I
Aan_R009163 Calypte anna Aan_R009163 I
TERF2 Canis familiaris ENSCAFG00000020267 I
TERF2 Cavia porcellus ENSCPOG00000003717 I
ENSCSAG00000004144 Chlorocebus sabaeus ENSCSAG00000004144 I
TERF2 Choloepus hoffmanni ENSCHOG00000010819 I
TERF2 Dasypus novemcinctus ENSDNOG00000014627 I
Terf2 Dipodomys ordii ENSDORG00000011208 I
TERF2 Echinops telfairi ENSETEG00000013553 I
TERF2 Equus caballus ENSECAG00000024534 I
ENSFCAG00000013579 Felis catus ENSFCAG00000013579 I
Gfo_R000556 Geospiza fortis Gfo_R000556 N
TERF2 Gorilla gorilla ENSGGOG00000004372 I
TERF2 Homo sapiens ENSG00000132604 I
ENSSTOG00000012882 Ictidomys tridecemlineatus ENSSTOG00000012882 I
ENSLOCG00000001317 Lepisosteus oculatus ENSLOCG00000001317 I
ENSP00000254942 Macaca fascicularis ENSP00000254942 I
TERF2 Macaca mulatta ENSMMUG00000016633 I
TERF2 Monodelphis domestica ENSMODG00000002766 I
ENSMPUG00000007352 Mustela putorius furo ENSMPUG00000007352 I
Terf2 Mus musculus ENSMUSG00000031921 D
Myotis_brandtii_TERF2_10022452 Myotis brandtii Myotis_brandtii_TERF2_10022452 I
TERF2 Myotis lucifugus ENSMLUG00000006584 I
ENSNLEG00000005506 Nomascus leucogenys ENSNLEG00000005506 I
TERF2 Ochotona princeps ENSOPRG00000006995 I
TERF2 Ornithorhynchus anatinus ENSOANG00000002365 I
TERF2 Oryctolagus cuniculus ENSOCUG00000017662 I
TERF2 Otolemur garnettii ENSOGAG00000008071 I
ENSOARG00000003567 Ovis aries ENSOARG00000003567 I
TERF2 Pan troglodytes ENSPTRG00000008281 I
ENSPANG00000018001 Papio anubis ENSPANG00000018001 I
ENSPSIG00000011530 Pelodiscus sinensis ENSPSIG00000011530 I
Pvit_16279 Pogona vitticeps Pvit_16279 I
ENSPPYG00000007505 Pongo abelii ENSPPYG00000007505 I
TERF2 Procavia capensis ENSPCAG00000006534 I
TERF2 Pteropus vampyrus ENSPVAG00000015982 I
Terf2 Rattus norvegicus ENSRNOG00000020435 I
ENSSHAG00000013733 Sarcophilus harrisii ENSSHAG00000013733 I
TERF2 Sus scrofa ENSSSCG00000002762 I
ENSTGUG00000008090 Taeniopygia guttata ENSTGUG00000008090 I
ENSTSYG00000008563 Tarsius syrichta ENSTSYG00000008563 I
TERF2 Tupaia belangeri ENSTBEG00000011528 I
TERF2 Tursiops truncatus ENSTTRG00000010015 I
Tal_R010022 Tyto alba Tal_R010022 I
TERF2 Vicugna pacos ENSVPAG00000003993 I
terf2.L Xenopus laevis XB-GENE-990302 I
terf2 Xenopus tropicalis XB-GENE-990299 I