ORGLA06G0204000 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA06G0204000 T276770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.891 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.883 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.883 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.883 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.883 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.883 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.881 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.881 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.881 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.800 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.785 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.785 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.785 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0204000.1 Myb 81 126

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018997 Ailuropoda melanoleuca ENSAMEG00000018997 I 0.000
ENSAMEG00000000053 Ailuropoda melanoleuca ENSAMEG00000000053 I 0.000
ENSBTAP00000019450-D1 Bos grunniens ENSBTAP00000019450-D1 I 0.000
ENSP00000314806-D2 Bos grunniens ENSP00000314806-D2 I 0.000
FOXR1 Bos taurus ENSBTAG00000014606 I 0.000
FOXR2 Bos taurus ENSBTAG00000046659 I 0.000
FOXR1 Callithrix jacchus ENSCJAG00000013656 I 0.000
FOXR1 Canis familiaris ENSCAFG00000012417 I 0.000
FOXR2 Canis familiaris ENSCAFG00000028624 I 0.000
ENSCPOG00000001855 Cavia porcellus ENSCPOG00000001855 I 0.000
ENSCSAG00000002556 Chlorocebus sabaeus ENSCSAG00000002556 I 0.000
FOXR2 Dasypus novemcinctus ENSDNOG00000019290 I 0.000
ENSDORG00000001960 Dipodomys ordii ENSDORG00000001960 I 0.000
FOXR1 Equus caballus ENSECAG00000016285 I 0.000
FOXR1 Felis catus ENSFCAG00000004719 I 0.000
FOXR1 Gorilla gorilla ENSGGOG00000001177 I 0.000
FOXR1 Homo sapiens ENSG00000176302 D 0.000
ENSSTOG00000014321 Ictidomys tridecemlineatus ENSSTOG00000014321 I 0.000
ENSSTOG00000014071 Ictidomys tridecemlineatus ENSSTOG00000014071 I 0.000
FOXR1 Loxodonta africana ENSLAFG00000002252 I 0.000
FOXR2 Loxodonta africana ENSLAFG00000028716 I 0.000
ENSP00000314806 Macaca fascicularis ENSP00000314806 I 0.000
ENSMMUG00000022722 Macaca mulatta ENSMMUG00000022722 I 0.000
ENSMEUG00000001623 Macropus eugenii ENSMEUG00000001623 I 0.000
ENSMICG00000002680 Microcebus murinus ENSMICG00000002680 I 0.000
ENSMICG00000014570 Microcebus murinus ENSMICG00000014570 I 0.000
ENSMODG00000013351 Monodelphis domestica ENSMODG00000013351 I 0.000
ENSMPUG00000018469 Mustela putorius furo ENSMPUG00000018469 I 0.000
ENSMPUG00000004890 Mustela putorius furo ENSMPUG00000004890 I 0.000
ENSNLEG00000007376 Nomascus leucogenys ENSNLEG00000007376 I 0.000
ENSOPRG00000016177 Ochotona princeps ENSOPRG00000016177 I 0.000
ENSOANG00000001452 Ornithorhynchus anatinus ENSOANG00000001452 I 0.000
ENSOCUG00000016258 Oryctolagus cuniculus ENSOCUG00000016258 I 0.000
FOXR2 Oryctolagus cuniculus ENSOCUG00000008672 I 0.000
FOXR1 Otolemur garnettii ENSOGAG00000007258 I 0.000
ENSOARG00000011919 Ovis aries ENSOARG00000011919 I 0.000
ENSOARG00000005555 Ovis aries ENSOARG00000005555 I 0.000
FOXR1 Pan troglodytes ENSPTRG00000004358 I 0.000
ENSPANG00000008911 Papio anubis ENSPANG00000008911 I 0.000
ENSPPYG00000003947 Pongo abelii ENSPPYG00000003947 I 0.000
FOXR1 Procavia capensis ENSPCAG00000010132 I 0.000
FOXR2 Procavia capensis ENSPCAG00000011045 I 0.000
FOXR1 Pteropus vampyrus ENSPVAG00000012488 I 0.000
Foxr1 Rattus norvegicus ENSRNOG00000029089 I 0.000
FOXR1 Sorex araneus ENSSARG00000011319 I 0.000
FOXR1 Sus scrofa ENSSSCG00000015101 I 0.000
FOXR2 Sus scrofa ENSSSCG00000020805 I 0.000
ENSTSYG00000002924 Tarsius syrichta ENSTSYG00000002924 I 0.000