CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI01G40390
(
Oryza rufipogon
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ORUFI01G40390
T276877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.744
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI01G40390.1
Myb
142
192
RMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYR
ORUFI01G40390.2
Myb
142
192
RMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Oryza rufipogon
TFs
244 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF19964
Drosophila ananassae
FBgn0096971
N
GJ14430
Drosophila virilis
FBgn0201641
N