ORUFI04G09590 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI04G09590 T276942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G09590.1 Myb 7 53
ORUFI04G09590.1 Myb 59 103

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I
ECANG7_03405 Echinococcus canadensis ECANG7_03405 N
EmuJ_000598400 Echinococcus multilocularis EmuJ_000598400 N
HHAL001110-PA Halyomorpha halys HHAL001110-PA I
TTAC_0000856801 Hydatigera taeniaeformis TTAC_0000856801 N
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N
HmN_000085400 Hymenolepis microstoma HmN_000085400 N
HNAJ_0000313601 Hymenolepis nana HNAJ_0000313601 N
MCOS_0000008701 Mesocestoides corti MCOS_0000008701 N
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N
nRc.2.0.1.g21954 Romanomermis culicivorax nRc.2.0.1.g21954 N
SSLN_0001285301 Schistocephalus solidus SSLN_0001285301 N
TASK_0000444001 Taenia asiatica TASK_0000444001 N