PGSC0003DMG400000189 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400000189 T277508_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.907 0.957
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.899 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.899 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.899 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.899 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.899 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.897 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.897 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.897 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.815 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.801 0.891
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.801 0.891
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.801 0.891
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.704 0.674
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.668 0.630
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.668 0.630
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.668 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400000546 Myb 55 100

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_00240 Arthroderma benhamiae ARB_00240 I
MCYG_05706 Arthroderma otae MCYG_05706 I
fgenesh1_pm.00659_#_1 Aspergillus carbonarius fgenesh1_pm.00659_#_1 I
fgenesh1_pm.00042_#_363 Aspergillus carbonarius fgenesh1_pm.00042_#_363 I
ACLA_084900 Aspergillus clavatus CADACLAG00007495 I
CADAFLAG00000859 Aspergillus flavus CADAFLAG00000859 I
CADAFLAG00004637 Aspergillus flavus CADAFLAG00004637 I
CADAFLAG00004736 Aspergillus flavus CADAFLAG00004736 I
AFUA_6G11230 Aspergillus fumigatus CADAFUAG00002339 I
AFUA_3G13600 Aspergillus fumigatus CADAFUAG00005567 I
ANIA_00568 Aspergillus nidulans CADANIAG00002110 D
CADANGAG00007073 Aspergillus niger CADANGAG00007073 I
CADAORAG00007699 Aspergillus oryzae CADAORAG00007699 I
CADAORAG00007608 Aspergillus oryzae CADAORAG00007608 I
EURHEDRAFT_465981 Aspergillus ruber EURHEDRAFT_465981 I
ATEG_05044 Aspergillus terreus CADATEAG00003666 I
PVAR5_6400 Byssochlamys spectabilis PVAR5_6400 I
A1O3_04931 Capronia epimyces A1O3_04931 I
CIMG_04445 Coccidioides immitis CIMG_04445 I
CPC735_073100 Coccidioides posadasii CPC735_073100 I
GLRG_07904 Colletotrichum graminicola GLRG_07904 I
CSUB01_08716 Colletotrichum sublineola CSUB01_08716 I
PV06_00500 Exophiala oligosperma PV06_00500 I
PV11_04029 Exophiala sideris PV11_04029 N
PV08_01656 Exophiala spinifera PV08_01656 I
NechaG51686 Fusarium solani NechaG51686 I
FVEG_12587 Fusarium verticillioides FVEG_12587 N
MCYG_05706 Microsporum canis MCYG_05706 I
MGYG_02800 Microsporum gypseum MGYG_02800 I
e_gw1.36.139.1 Nectria haematococca e_gw1.36.139.1 I
NFIA_056930 Neosartorya fischeri CADNFIAG00005285 I
NFIA_063760 Neosartorya fischeri CADNFIAG00006020 I
estExt_Genewise1.C_50767 Neurospora discreta estExt_Genewise1.C_50767 I
PMAA_052840 Penicillium marneffei PMAA_052840 I
PMAA_012040 Penicillium marneffei PMAA_012040 N
PDE_07973 Penicillium oxalicum PDE_07973 I
U727_00433165191 Penicillium solitum U727_00433165191 I
SAPIO_CDS7742 Scedosporium apiospermum SAPIO_CDS7742 N
SMAC_06700 Sordaria macrospora SMAC_06700 I
SPBR_03934 Sporothrix brasiliensis SPBR_03934 I
HMPREF1624_07087 Sporothrix schenckii HMPREF1624_07087 I
PMAA_012040 Talaromyces marneffei PMAA_012040 N
PMAA_052840 Talaromyces marneffei PMAA_052840 I
TSTA_122680 Talaromyces stipitatus TSTA_122680 I
TSTA_020100 Talaromyces stipitatus TSTA_020100 I
TRIATDRAFT_35738 Trichoderma atroviride TRIATDRAFT_35738 I
TRIVIDRAFT_158628 Trichoderma virens TRIVIDRAFT_158628 N
TRIVIDRAFT_124610 Trichoderma virens TRIVIDRAFT_124610 I
TEQG_00731 Trichophyton equinum TEQG_00731 I
H101_00939 Trichophyton interdigitale H101_00939 I
H102_02125 Trichophyton rubrum H102_02125 I
H105_02141 Trichophyton soudanense H105_02141 I
TESG_04636 Trichophyton tonsurans TESG_04636 I
TRV_05232 Trichophyton verrucosum TRV_05232 I
UREG_01672 Uncinocarpus reesii UREG_01672 I
VDBG_01341 Verticillium albo atrum VDBG_01341 I
VDBG_01341 Verticillium alfalfae VDBG_01341 I
VDAG_07912 Verticillium dahliae VDAG_07912 I