PGSC0003DMG400002138 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400002138 T277525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.901 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.957
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.883 0.936
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.841 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400005476 Myb 593 643

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF287 Callithrix jacchus ENSCJAG00000011933 I
ZNF287 Canis familiaris ENSCAFG00000017966 I
ENSCPOG00000011595 Cavia porcellus ENSCPOG00000011595 I
ENSCSAG00000008835 Chlorocebus sabaeus ENSCSAG00000008835 I
ZNF287 Choloepus hoffmanni ENSCHOG00000011118 I
ZNF287 Dasypus novemcinctus ENSDNOG00000016902 I
Zfp287 Dipodomys ordii ENSDORG00000009473 I
ZNF287 Echinops telfairi ENSETEG00000008692 I
ZNF287 Equus caballus ENSECAG00000003319 I
ENSEEUG00000003272 Erinaceus europaeus ENSEEUG00000003272 I
ENSGGOG00000022969 Gorilla gorilla ENSGGOG00000022969 I
ZNF287 Homo sapiens ENSG00000141040 D
ENSSTOG00000015214 Ictidomys tridecemlineatus ENSSTOG00000015214 I
ZNF287 Loxodonta africana ENSLAFG00000016502 I
ENSP00000379169 Macaca fascicularis ENSP00000379169 I
ZNF287 Macaca mulatta ENSMMUG00000016723 I
ENSMPUG00000010118 Mustela putorius furo ENSMPUG00000010118 I
Zfp287 Mus musculus ENSMUSG00000005267 I
Myotis_brandtii_ZNF287_10023285 Myotis brandtii Myotis_brandtii_ZNF287_10023285 I
ENSNLEG00000014695 Nomascus leucogenys ENSNLEG00000014695 I
ZNF287 Ochotona princeps ENSOPRG00000017300 I
ENSOCUG00000009359 Oryctolagus cuniculus ENSOCUG00000009359 I
ENSOARG00000016845 Ovis aries ENSOARG00000016845 I
ENSPTRG00000008815 Pan troglodytes ENSPTRG00000008815 I
ENSPANG00000023719 Papio anubis ENSPANG00000023719 I
ENSPPYG00000008021 Pongo abelii ENSPPYG00000008021 I
ENSPCAG00000005147 Procavia capensis ENSPCAG00000005147 I
ENSPVAG00000004670 Pteropus vampyrus ENSPVAG00000004670 I
Zfp287 Rattus norvegicus ENSRNOG00000003215 I
ENSSARG00000012225 Sorex araneus ENSSARG00000012225 I
ZNF287 Sus scrofa ENSSSCG00000018031 I
ENSTBEG00000009446 Tupaia belangeri ENSTBEG00000009446 I
ENSVPAG00000009838 Vicugna pacos ENSVPAG00000009838 I