POPTR_0001s25040 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s25040 T278196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.720 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s25040.1 Myb 118 168

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACUA000547 Anopheles culicifacies ACUA000547 N
AMAM019679 Anopheles maculatus AMAM019679 N
egrh-1 Caenorhabditis elegans WBGene00007772 D
HelroG93112 Helobdella robusta HelroG93112 N
EGR3 Loxodonta africana ENSLAFG00000028225 I
EGR3 Monodelphis domestica ENSMODG00000023162 N
ENSPMAG00000005737 Petromyzon marinus ENSPMAG00000005737 N
Egr3 Rattus norvegicus ENSRNOG00000017828 I
ENSSHAG00000006904 Sarcophilus harrisii ENSSHAG00000006904 N
EGR2 Tursiops truncatus ENSTTRG00000010004 N