POPTR_0006s29080 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0006s29080 T278318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.687 0.720
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.687 0.720
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.686 0.710
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.670 0.667
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.670 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s29080.1 Myb 14 61
POPTR_0006s29080.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

485 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB03036.1 Alternaria brassicicola AB03036.1 I
AOL_s00193g129 Arthrobotrys oligospora AOL_s00193g129 I
ARB_04706 Arthroderma benhamiae ARB_04706 I
MCYG_06105 Arthroderma otae MCYG_06105 I
COCC4DRAFT_73197 Bipolaris maydis COCC4DRAFT_73197 I
COCMIDRAFT_35701 Bipolaris oryzae COCMIDRAFT_35701 I
COCSADRAFT_175469 Bipolaris sorokiniana COCSADRAFT_175469 I
COCVIDRAFT_36324 Bipolaris victoriae COCVIDRAFT_36324 I
COCCADRAFT_6589 Bipolaris zeicola COCCADRAFT_6589 I
Bcin01g10720 Botrytis cinerea Bcin01g10720 I
A1O1_04217 Capronia coronata A1O1_04217 I
A1O3_01201 Capronia epimyces A1O3_01201 I
PV04_02426 Capronia semiimmersa PV04_02426 I
CTHT_0041740 Chaetomium thermophilum CTHT_0041740 I
Z519_11340 Cladophialophora bantiana Z519_11340 I
G647_08755 Cladophialophora carrionii G647_08755 I
PV07_02793 Cladophialophora immunda PV07_02793 I
A1O5_10463 Cladophialophora psammophila A1O5_10463 I
A1O7_02244 Cladophialophora yegresii A1O7_02244 I
CFIO01_06850 Colletotrichum fioriniae CFIO01_06850 I
CGGC5_1402 Colletotrichum gloeosporioides CGGC5_1402 I
GLRG_06548 Colletotrichum graminicola GLRG_06548 I
CH063_07689 Colletotrichum higginsianum CH063_07689 I
Cob_09205 Colletotrichum orbiculare Cob_09205 I
Cob_11078 Colletotrichum orbiculare Cob_11078 I
fgenesh1_pg.C_scaffold_9000354 Cryphonectria parasitica fgenesh1_pg.C_scaffold_9000354 I
HMPREF1541_00985 Cyphellophora europaea HMPREF1541_00985 I
H072_4417 Dactylellina haptotyla H072_4417 I
UCREL1_4517 Eutypa lata UCREL1_4517 I
A1O9_07137 Exophiala aquamarina A1O9_07137 I
HMPREF1120_08353 Exophiala dermatitidis HMPREF1120_08353 I
PV10_00855 Exophiala mesophila PV10_00855 I
PV06_04883 Exophiala oligosperma PV06_04883 I
PV11_03606 Exophiala sideris PV11_03606 I
PV08_03176 Exophiala spinifera PV08_03176 I
PV05_07246 Exophiala xenobiotica PV05_07246 I
Z517_00407 Fonsecaea pedrosoi Z517_00407 I
GGTG_07647 Gaeumannomyces graminis GGTG_07647 I
LEMA_P091860.1 Leptosphaeria maculans LEMA_P091860.1 I
MPH_04494 Macrophomina phaseolina MPH_04494 I
MGG_07925 Magnaporthe oryzae MGG_07925 I
MCYG_06105 Microsporum canis MCYG_06105 I
MGYG_05848 Microsporum gypseum MGYG_05848 I
NCU05637 Neurospora crassa NCU05637 D
NEUTE1DRAFT_148609 Neurospora tetrasperma NEUTE1DRAFT_148609 I
OIDMADRAFT_28300 Oidiodendron maius OIDMADRAFT_28300 I
PMAA_011030 Penicillium marneffei PMAA_011030 I
SNOG_11524 Phaeosphaeria nodorum SNOG_11524 I
PODANS_4_5950 Podospora anserina PODANS_4_5950 N
GMDG_04247 Pseudogymnoascus destructans GMDG_04247 I
V499_07415 Pseudogymnoascus pannorum V499_07415 I
PTT_11477 Pyrenophora teres PTT_11477 I
Z518_01937 Rhinocladiella mackenziei Z518_01937 I
Z518_04811 Rhinocladiella mackenziei Z518_04811 I
SAPIO_CDS9377 Scedosporium apiospermum SAPIO_CDS9377 I
SBOR_0775 Sclerotinia borealis SBOR_0775 I
SETTUDRAFT_113025 Setosphaeria turcica SETTUDRAFT_113025 I
SNOG_11524 Stagonospora nodorum SNOG_11524 I
PMAA_011030 Talaromyces marneffei PMAA_011030 I
TSTA_006150 Talaromyces stipitatus TSTA_006150 I
THITE_2126380 Thielavia terrestris THITE_2126380 I
UCRPA7_1223 Togninia minima UCRPA7_1223 I
H101_03147 Trichophyton interdigitale H101_03147 I
H102_02228 Trichophyton rubrum H102_02228 I
H105_02247 Trichophyton soudanense H105_02247 I
TESG_07963 Trichophyton tonsurans TESG_07963 I
TRV_07523 Trichophyton verrucosum TRV_07523 I
GSTUM_00005043001 Tuber melanosporum GSTUM_00005043001 I
PV09_00512 Verruconis gallopava PV09_00512 I
VDBG_10032 Verticillium albo atrum VDBG_10032 I
VDBG_10032 Verticillium alfalfae VDBG_10032 I