CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0008s09400
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0008s09400
T278347_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0008s09400.1
Myb
259
309
SCKWAKEEERVFHEVVYSRPESLGQNFWKHLAQVFPDRTTKEIVSYYFNVF
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava12684.valid.m1
Manihot esculenta
cassava12684.valid.m1
N
0.710
POPTR_0010s16720
Populus trichocarpa
POPTR_0010s16720
N
0.767
30174.m009128
Ricinus communis
30174.m009128
N
0.686
SapurV1A.0072s0050
Salix purpurea
SapurV1A.0072s0050
N
0.736
SapurV1A.0176s0160
Salix purpurea
SapurV1A.0176s0160
N
0.820