Solyc04g011650.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc04g011650.2 T280097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.820 0.915
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.820 0.894
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.820 0.894
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.820 0.894
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.802 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g011650.2.1 Myb 544 594

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.000
CaO19.12230 Candida albicans CaO19.12230 N 0.000
CaO19.4766 Candida albicans CaO19.4766 N 0.000
CD36_08580 Candida dubliniensis CD36_08580 N 0.000
CLUG_05051 Candida lusitaniae CLUG_05051 N 0.000
G210_5450 Candida maltosa G210_5450 N 0.000
CORT_0G01040 Candida orthopsilosis CORT_0G01040 N 0.000
CPAG_04295 Candida parapsilosis CPAG_04295 N 0.000
CTRG_03264 Candida tropicalis CTRG_03264 N 0.000
CLUG_05051 Clavispora lusitaniae CLUG_05051 N 0.000
DEHA2A03520g Debaryomyces hansenii DEHA2A03520g N 0.000
GNLVRS01_PISO0J07335g Millerozyma farinosa GNLVRS01_PISO0J07335g N 0.000
fgenesh1_pg.C_chr_3.1000414 Pichia stipitis fgenesh1_pg.C_chr_3.1000414 N 0.000
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.000
PICST_30827 Scheffersomyces stipitis PICST_30827 N 0.000
SPAPADRAFT_55840 Spathaspora passalidarum SPAPADRAFT_55840 N 0.000
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.000