Solyc05g055030.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc05g055030.1 T280138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.738 0.796
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.738 0.796
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.737 0.785
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.737 0.785
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.734 0.806
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.734 0.806
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.734 0.806
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.734 0.806
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.699 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.699 0.785
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.696 0.699
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.696 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g055030.1.1 Myb 14 61
Solyc05g055030.1.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

398 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079180 Acremonium chrysogenum ACRE_079180 I 0.000
BBA_04449 Beauveria bassiana BBA_04449 I 0.000
BOTBODRAFT_92498 Botryobasidium botryosum BOTBODRAFT_92498 I 0.000
Bcin07g02960 Botrytis cinerea Bcin07g02960 I 0.000
CHGG_05891 Chaetomium globosum CHGG_05891 I 0.000
CTHT_0009000 Chaetomium thermophilum CTHT_0009000 I 0.000
CPUR_03253 Claviceps purpurea CPUR_03253 I 0.000
CFIO01_10932 Colletotrichum fioriniae CFIO01_10932 I 0.000
CGGC5_4872 Colletotrichum gloeosporioides CGGC5_4872 I 0.000
GLRG_04053 Colletotrichum graminicola GLRG_04053 I 0.000
CH063_09324 Colletotrichum higginsianum CH063_09324 I 0.000
Cob_08105 Colletotrichum orbiculare Cob_08105 I 0.000
CSUB01_03838 Colletotrichum sublineola CSUB01_03838 I 0.000
CCM_07005 Cordyceps militaris CCM_07005 I 0.000
estExt_fgenesh1_pm.C_140003 Cryphonectria parasitica estExt_fgenesh1_pm.C_140003 I 0.000
FFUJ_01365 Fusarium fujikuroi FFUJ_01365 I 0.000
FGRRES_15831 Fusarium graminearum FGRRES_15831 I 0.000
FOXG_00218 Fusarium oxysporum FOXG_00218 I 0.000
FPSE_02604 Fusarium pseudograminearum FPSE_02604 I 0.000
GGTG_04163 Gaeumannomyces graminis GGTG_04163 I 0.000
CMQ_8013 Grosmannia clavigera CMQ_8013 I 0.000
MGG_10837 Magnaporthe oryzae MGG_10837 I 0.000
MAPG_00558 Magnaporthe poae MAPG_00558 I 0.000
MAC_04202 Metarhizium acridum MAC_04202 I 0.000
MAM_07644 Metarhizium album MAM_07644 I 0.000
MANI_024675 Metarhizium anisopliae MANI_024675 I 0.000
MBR_03633 Metarhizium brunneum MBR_03633 I 0.000
MGU_04823 Metarhizium guizhouense MGU_04823 I 0.000
MAJ_02156 Metarhizium majus MAJ_02156 I 0.000
X797_003690 Metarhizium robertsii X797_003690 I 0.000
MYCTH_2296905 Myceliophthora thermophila MYCTH_2296905 I 0.000
NCU02957 Neurospora crassa NCU02957 D 0.000
estExt_Genewise1.C_40527 Neurospora discreta estExt_Genewise1.C_40527 I 0.000
NEUTE1DRAFT_150703 Neurospora tetrasperma NEUTE1DRAFT_150703 I 0.000
OIDMADRAFT_110480 Oidiodendron maius OIDMADRAFT_110480 I 0.000
OIDMADRAFT_57256 Oidiodendron maius OIDMADRAFT_57256 I 0.000
F503_01009 Ophiostoma piceae uamh F503_01009 I 0.000
PFICI_01786 Pestalotiopsis fici PFICI_01786 I 0.000
PODANS_1_18420 Podospora anserina PODANS_1_18420 I 0.000
SAPIO_CDS5040 Scedosporium apiospermum SAPIO_CDS5040 I 0.000
SBOR_5241 Sclerotinia borealis SBOR_5241 I 0.000
SS1G_01995 Sclerotinia sclerotiorum SS1G_01995 I 0.000
SMAC_00493 Sordaria macrospora SMAC_00493 I 0.000
SPBR_01576 Sporothrix brasiliensis SPBR_01576 I 0.000
HMPREF1624_03694 Sporothrix schenckii HMPREF1624_03694 I 0.000
S40288_08146 Stachybotrys chartarum S40288_08146 I 0.000
S40285_00887 Stachybotrys chlorohalonata S40285_00887 I 0.000
THITE_2112332 Thielavia terrestris THITE_2112332 I 0.000
VHEMI06417 Torrubiella hemipterigena VHEMI06417 I 0.000
TRIATDRAFT_299973 Trichoderma atroviride TRIATDRAFT_299973 I 0.000
TRIREDRAFT_122371 Trichoderma reesei TRIREDRAFT_122371 I 0.000
TRIVIDRAFT_35604 Trichoderma virens TRIVIDRAFT_35604 I 0.000
UV8b_5697 Ustilaginoidea virens UV8b_5697 I 0.000
VDBG_06134 Verticillium albo atrum VDBG_06134 I 0.000
VDBG_06134 Verticillium alfalfae VDBG_06134 I 0.000
VDAG_03292 Verticillium dahliae VDAG_03292 I 0.000