CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TCM_018971 *(Theobroma cacao)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	TCM_018971	T280526_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ATMYB121 M07091_2.00	Arabidopsis thaliana	NYNWACCTAMYHHH	DDDRKTAGGTWNRN	Dap-seq OMalley et al.(2016) MYB121_col_a	0.817	0.871
MYB27 M07097_2.00	Arabidopsis thaliana	HHTACCTAAYTTWWN	NWWAARTTAGGTADD	Dap-seq OMalley et al.(2016) MYB27_col_a	0.699	0.677
MYB27 M07098_2.00	Arabidopsis thaliana	NYHTACCTAAYTTWHN	NDWAARTTAGGTADRN	Dap-seq OMalley et al.(2016) MYB27_colamp_a	0.699	0.677
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.697	0.656
MYB62 M07027_2.00	Arabidopsis thaliana	NHRCCTAAYTWNHNN	NNDNWARTTAGGYDN	Dap-seq OMalley et al.(2016) MYB62_col_a	0.686	0.710
MYB62 M07028_2.00	Arabidopsis thaliana	HNKRCCTAACTHH	DDAGTTAGGYMND	Dap-seq OMalley et al.(2016) MYB62_colamp_a	0.686	0.710
MYB116 M07014_2.00	Arabidopsis thaliana	NRCCTAAYTWNWNNN	NNNWNWARTTAGGYN	Dap-seq OMalley et al.(2016) MYB116_col_a	0.676	0.688
MYB116 M07015_2.00	Arabidopsis thaliana	HNTRCCTAACTHH	DDAGTTAGGYAND	Dap-seq OMalley et al.(2016) MYB116_colamp_a	0.676	0.688
MYB59 M00883_2.00	Arabidopsis thaliana	NKACCTAAYN	NRTTAGGTMN	PBM Franco-Zorrilla et al.(2014) MYB59	0.668	0.710
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EOY03785	Myb	16	63	KGPWTPEEDKLLTEYVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYL
EOY03785	Myb	69	114	RGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHF

Links
Other Myb/SANT family TFs
Other *Theobroma cacao* TFs

460 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ANCCAN_00168	Ancylostoma caninum	ANCCAN_00168	N
ANCCEY_04131	Ancylostoma ceylanicum	ANCCEY_04131	N
ANCDUO_06348	Ancylostoma duodenale	ANCDUO_06348	N
DICVIV_12096	Dictyocaulus viviparus	DICVIV_12096	N
HCOI01523700	Haemonchus contortus	HCOI01523700	N
HPLM_0000504501	Haemonchus placei	HPLM_0000504501	N
Hba_18950	Heterorhabditis bacteriophora	Hba_18950	I
NBR_0000590001	Nippostrongylus brasiliensis	NBR_0000590001	N
SVUK_0000985101	Strongylus vulgaris	SVUK_0000985101	N
foxj1b	Tetraodon nigroviridis	ENSTNIG00000012916	I