CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_022457
(
Theobroma cacao
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TCM_022457
T280554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY08130
Myb
125
185
TGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLY
EOY08130
Myb
420
478
DGWQESEISRLIQLRTSMESRFHQGACSEEILWEEIAAKMACLGFDRSALMCKEKWNSI
Links
Other
Myb/SANT
family TFs
Other
Theobroma cacao
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTL
Arabidopsis thaliana
AT5G03680
N
0.695
Bo9g181820
Brassica oleracea
Bo9g181820
N
0.709
Cagra.0154s0034
Capsella grandiflora
Cagra.0154s0034
N
0.706
Carubv10000532m.g
Capsella rubella
Carubv10000532m.g
N
0.706
evm.TU.supercontig_5.72
Carica papaya
evm.TU.supercontig_5.72
N
0.769
Thhalv10013048m.g
Eutrema salsugineum
Thhalv10013048m.g
N
0.725
Gorai.002G159600
Gossypium raimondii
Gorai.002G159600
N
0.670
cassava29591.valid.m1
Manihot esculenta
cassava29591.valid.m1
N
0.755
POPTR_0008s02580
Populus trichocarpa
POPTR_0008s02580
N
0.680
POPTR_0010s24140
Populus trichocarpa
POPTR_0010s24140
N
0.682
29092.m000461
Ricinus communis
29092.m000461
N
0.786
PGSC0003DMG400002710
Solanum tuberosum
PGSC0003DMG400002710
N
0.739
TCM_044087
Theobroma cacao
TCM_044087
N
0.674
VIT_08s0007g03820
Vitis vinifera
VIT_08s0007g03820
N
0.761
VIT_13s0074g00400
Vitis vinifera
VIT_13s0074g00400
N
0.708