TCM_028884 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_028884 T280572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.899 0.979
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.889 0.936
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.888 0.936
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.881 0.915
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.869 0.872
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.850 0.936
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.829 0.872
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.829 0.872
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.829 0.872
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.823 0.872
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.823 0.872
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.819 0.872
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.819 0.872
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.819 0.872
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.778 0.851
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.778 0.851
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.772 0.872
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.759 0.702
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.759 0.702
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.749 0.830
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.749 0.830
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.749 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY26924 Myb 110 157

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

596 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007962 Acyrthosiphon pisum ACYPI007962 N 0.000
AAEL003602 Aedes aegypti AAEL003602 N 0.000
AALB005765 Anopheles albimanus AALB005765 N 0.000
AARA007771 Anopheles arabiensis AARA007771 N 0.000
AATE006171 Anopheles atroparvus AATE006171 N 0.000
ACHR001790 Anopheles christyi ACHR001790 N 0.000
ACUA006984 Anopheles culicifacies ACUA006984 N 0.000
ADIR008055 Anopheles dirus ADIR008055 N 0.000
AEPI001699 Anopheles epiroticus AEPI001699 N 0.000
AFAF012484 Anopheles farauti AFAF012484 N 0.000
AFUN008026 Anopheles funestus AFUN008026 N 0.000
AGAP007109 Anopheles gambiae AGAP007109 N 0.000
AMAM024265 Anopheles maculatus AMAM024265 N 0.000
AMEC019433 Anopheles melas AMEC019433 N 0.000
AMEC009079 Anopheles melas AMEC009079 N 0.000
AMEM014597 Anopheles merus AMEM014597 N 0.000
AMIN011248 Anopheles minimus AMIN011248 N 0.000
AQUA002036 Anopheles quadriannulatus AQUA002036 N 0.000
ASIS021384 Anopheles sinensis ASIS021384 N 0.000
ASTEI06883 Anopheles stephensi ASTEI06883 N 0.000
GB51047 Apis mellifera GB51047 N 0.000
ACEP12467 Atta cephalotes ACEP12467 N 0.000
BGIBMGA012741 Bombyx mori BGIBMGA012741 N 0.000
fgenesh2_pg.scaffold_282000018 Branchiostoma floridae fgenesh2_pg.scaffold_282000018 N 0.000
Cflo_02233--XP_001120809.1_APIME Camponotus floridanus Cflo_02233--XP_001120809.1_APIME N 0.000
CapteG221467 Capitella teleta CapteG221467 N 0.000
CLEC010738 Cimex lectularius CLEC010738 N 0.000
CpipJ_CPIJ004963 Culex pipiens CpipJ_CPIJ004963 N 0.000
CPIJ004963 Culex quinquefasciatus CPIJ004963 N 0.000
KGM_11907 Danaus plexippus KGM_11907 N 0.000
GF23998 Drosophila ananassae FBgn0100992 N 0.000
GG15296 Drosophila erecta FBgn0107548 N 0.000
GH14523 Drosophila grimshawi FBgn0121999 N 0.000
GH25273 Drosophila grimshawi FBgn0132728 N 0.000
CG13287 Drosophila melanogaster FBgn0035643 N 0.000
GI13299 Drosophila mojavensis FBgn0136056 N 0.000
GL21034 Drosophila persimilis FBgn0158629 N 0.000
GA12173 Drosophila pseudoobscura FBgn0072221 N 0.000
GM14727 Drosophila sechellia FBgn0169648 N 0.000
GD13907 Drosophila simulans FBgn0185603 N 0.000
GJ12068 Drosophila virilis FBgn0199320 N 0.000
GK16660 Drosophila willistoni FBgn0218662 N 0.000
GE21517 Drosophila yakuba FBgn0238774 N 0.000
ENSGMOG00000016370 Gadus morhua ENSGMOG00000016370 N 0.000
HHAL003310-PA Halyomorpha halys HHAL003310-PA N 0.000
Hsal_04139--XP_001120809.1_APIME Harpegnathos saltator Hsal_04139--XP_001120809.1_APIME N 0.000
HMEL017852 Heliconius melpomene HMEL017852 N 0.000
ISCW009928 Ixodes scapularis ISCW009928 N 0.000
LDEC001191 Leptinotarsa decemlineata LDEC001191 N 0.000
LotgiG69958 Lottia gigantea LotgiG69958 N 0.000
LCUP008185 Lucilia cuprina LCUP008185 N 0.000
MCINX010301 Melitaea cinxia MCINX010301 N 0.000
MDOA007546 Musca domestica MDOA007546 N 0.000
NV17890 Nasonia vitripennis NV17890 N 0.000
Ocbimv22006527m.g Octopus bimaculoides Ocbimv22006527m.g N 0.000
PHUM271650 Pediculus humanus PHUM271650 N 0.000
PPAI006396 Phlebotomus papatasi PPAI006396 N 0.000
Sakowv30017448m.g Saccoglossus kowalevskii Sakowv30017448m.g N 0.000
SINV25005 Solenopsis invicta SINV25005 N 0.000
SMAR006435 Strigamia maritima SMAR006435 N 0.000
tetur11g03890 Tetranychus urticae tetur11g03890 N 0.000
TC013073 Tribolium castaneum TC013073 N 0.000
L798_05037 Zootermopsis nevadensis L798_05037 N 0.000