CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIUR3_12301
(
Triticum urartu
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TRIUR3_12301
T281458_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB15
M07084_2.00
Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN
Dap-seq
OMalley et al.(2016)
ATY19_col_a
0.674
0.818
MYB15
M02699_2.00
Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG
SELEX
Mathelier et al.(2014)
MA0574.1
0.674
0.818
MYB15
M11041_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_01
0.674
0.818
MYB15
M11042_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_Q2
0.674
0.818
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRIUR3_12301-P1
Myb
14
61
RGPWTAEEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYL
TRIUR3_12301-P1
Myb
67
107
RGNFTSEEEEAIIQLHAMLGNRWSTIAARLPGRTDNEIKNA
Links
Other
Myb/SANT
family TFs
Other
Triticum urartu
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action