VIT_06s0004g00570 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_06s0004g00570 T281938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.850 0.935
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.689 0.699
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.682 0.645
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.682 0.645
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.681 0.667
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.666 0.720
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.666 0.720
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.663 0.742
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.661 0.645
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g00570.t01 Myb 27 74
VIT_06s0004g00570.t01 Myb 80 125

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

656 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014030 Ailuropoda melanoleuca ENSAMEG00000014030 N
ENSBTAP00000002120-D1 Bos grunniens ENSBTAP00000002120-D1 N
ZNF592 Bos taurus ENSBTAG00000001616 N
ZNF592 Callithrix jacchus ENSCJAG00000016173 N
ZNF592 Canis familiaris ENSCAFG00000012909 N
ZNF592 Cavia porcellus ENSCPOG00000008571 N
ENSCSAG00000017243 Chlorocebus sabaeus ENSCSAG00000017243 N
ZNF592 Dasypus novemcinctus ENSDNOG00000037550 N
ZNF592 Echinops telfairi ENSETEG00000006646 N
ZNF592 Equus caballus ENSECAG00000016283 N
ZNF592 Felis catus ENSFCAG00000013599 N
ZNF592 Gorilla gorilla ENSGGOG00000009373 N
ZNF592 Homo sapiens ENSG00000166716 N
ENSSTOG00000012942 Ictidomys tridecemlineatus ENSSTOG00000012942 N
ENSP00000299927 Macaca fascicularis ENSP00000299927 N
ZNF592 Macaca mulatta ENSMMUG00000010432 N
ENSMPUG00000015616 Mustela putorius furo ENSMPUG00000015616 N
Zfp592 Mus musculus ENSMUSG00000005621 N
Myotis_brandtii_ZNF592_10013213 Myotis brandtii Myotis_brandtii_ZNF592_10013213 N
ZNF592 Myotis lucifugus ENSMLUG00000005645 N
ENSNLEG00000011267 Nomascus leucogenys ENSNLEG00000011267 N
ZNF592 Oryctolagus cuniculus ENSOCUG00000005980 N
ZNF592 Otolemur garnettii ENSOGAG00000002465 N
ZNF592 Pan troglodytes ENSPTRG00000007405 N
ENSPANG00000022572 Papio anubis ENSPANG00000022572 N
ENSPPYG00000006882 Pongo abelii ENSPPYG00000006882 N
Zfp592 Rattus norvegicus ENSRNOG00000060206 N
ZNF592 Tupaia belangeri ENSTBEG00000005454 N