cassava13649.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava13649.valid.m1 T284007_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13649.valid.m1 Myb 42 109

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GB41522 Apis mellifera GB41522 N
ACEP16799 Atta cephalotes ACEP16799 N
Cflo_02309--XP_392422.2_APIME Camponotus floridanus Cflo_02309--XP_392422.2_APIME N
Hsal_02319--XP_392422.2_APIME Harpegnathos saltator Hsal_02319--XP_392422.2_APIME N
NV13224 Nasonia vitripennis NV13224 N