cassava29150.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava29150.valid.m1 T284156_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.897 0.968
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.897 0.968
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.821 0.914
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.674 0.731
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava29150.valid.m1 Myb 14 61
cassava29150.valid.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

616 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007488 Ailuropoda melanoleuca ENSAMEG00000007488 I
Alligator_sinensis_CCG017634.1 Alligator sinensis Alligator_sinensis_CCG017634.1 I
ENSAPLG00000002423 Anas platyrhynchos ENSAPLG00000002423 I
SPI1 Anolis carolinensis ENSACAG00000002490 I
Afo_R002289 Aptenodytes forsteri Afo_R002289 I
ENSAMXG00000015800 Astyanax mexicanus ENSAMXG00000015800 I
ENSAMXG00000006005 Astyanax mexicanus ENSAMXG00000006005 I
ENSAMXG00000017734 Astyanax mexicanus ENSAMXG00000017734 I
ENSP00000227163-D1 Bos grunniens ENSP00000227163-D1 I
SPI1 Bos taurus ENSBTAG00000021709 I
fgenesh2_pg.scaffold_167000085 Branchiostoma floridae fgenesh2_pg.scaffold_167000085 I
Brh_R000822 Buceros rhinoceros Brh_R000822 I
SPI1 Callithrix jacchus ENSCJAG00000020100 I
Aan_R012619 Calypte anna Aan_R012619 I
SPI1 Canis familiaris ENSCAFG00000008723 I
SPI1 Cavia porcellus ENSCPOG00000022138 I
Cmyd_10014952 Chelonia mydas Cmyd_10014952 I
ENSCSAG00000005757 Chlorocebus sabaeus ENSCSAG00000005757 I
csin100106 Clonorchis sinensis csin100106 I
CR936540.2 Danio rerio ENSDARG00000098472 I
spi1b Danio rerio ENSDARG00000000767 I
SPI1 Dasypus novemcinctus ENSDNOG00000041462 I
Spi1 Dipodomys ordii ENSDORG00000007758 I
SPI1 Echinops telfairi ENSETEG00000000432 I
SPI1 Equus caballus ENSECAG00000024457 I
D915_04898 Fasciola hepatica D915_04898 I
SPI1 Felis catus ENSFCAG00000002531 I
ENSFALG00000006392 Ficedula albicollis ENSFALG00000006392 I
ENSGMOG00000018771 Gadus morhua ENSGMOG00000018771 I
ENSGMOG00000003788 Gadus morhua ENSGMOG00000003788 I
SPI1 Gallus gallus ENSGALG00000008127 I
ENSGACG00000003298 Gasterosteus aculeatus ENSGACG00000003298 I
spi1b Gasterosteus aculeatus ENSGACG00000015525 I
spic Gasterosteus aculeatus ENSGACG00000019889 I
Gfo_R014179 Geospiza fortis Gfo_R014179 I
SPI1 Gorilla gorilla ENSGGOG00000006485 I
SPI1 Homo sapiens ENSG00000066336 D
ENSSTOG00000022735 Ictidomys tridecemlineatus ENSSTOG00000022735 I
ENSLACG00000022621 Latimeria chalumnae ENSLACG00000022621 I
ENSLACG00000018937 Latimeria chalumnae ENSLACG00000018937 I
ENSLOCG00000006249 Lepisosteus oculatus ENSLOCG00000006249 I
ENSLOCG00000015193 Lepisosteus oculatus ENSLOCG00000015193 I
ENSLOCG00000009705 Lepisosteus oculatus ENSLOCG00000009705 I
SPI1 Loxodonta africana ENSLAFG00000004062 I
SPI1 Meleagris gallopavo ENSMGAG00000010682 I
SPI1 Monodelphis domestica ENSMODG00000019909 I
ENSMPUG00000004125 Mustela putorius furo ENSMPUG00000004125 I
Spi1 Mus musculus ENSMUSG00000002111 D
Myotis_brandtii_Mybpc3_10025524 Myotis brandtii Myotis_brandtii_Mybpc3_10025524 I
ENSNLEG00000014555 Nomascus leucogenys ENSNLEG00000014555 I
Ogr17892 Ophisaurus gracilis Ogr17892 I
T265_00069 Opisthorchis viverrini T265_00069 N
ENSONIG00000000031 Oreochromis niloticus ENSONIG00000000031 I
ENSONIG00000002940 Oreochromis niloticus ENSONIG00000002940 I
SPI1 Ornithorhynchus anatinus ENSOANG00000009414 I
spi1b Oryzias latipes ENSORLG00000006090 I
ENSORLG00000007287 Oryzias latipes ENSORLG00000007287 I
spic Oryzias latipes ENSORLG00000015777 I
SPI1 Otolemur garnettii ENSOGAG00000012435 I
ENSOARG00000006553 Ovis aries ENSOARG00000006553 I
ENSPANG00000004468 Papio anubis ENSPANG00000004468 I
ENSPSIG00000004344 Pelodiscus sinensis ENSPSIG00000004344 I
ENSPFOG00000001948 Poecilia formosa ENSPFOG00000001948 I
ENSPFOG00000003818 Poecilia formosa ENSPFOG00000003818 I
ENSPFOG00000010380 Poecilia formosa ENSPFOG00000010380 I
Pvit_08680 Pogona vitticeps Pvit_08680 I
ENSPPYG00000003306 Pongo abelii ENSPPYG00000003306 I
ENSPCAG00000016572 Procavia capensis ENSPCAG00000016572 I
SPI1 Pteropus vampyrus ENSPVAG00000007336 I
Spi1 Rattus norvegicus ENSRNOG00000012172 I
Sakowv30044763m.g Saccoglossus kowalevskii Sakowv30044763m.g I
ENSSHAG00000017291 Sarcophilus harrisii ENSSHAG00000017291 I
SPI1 Sus scrofa ENSSSCG00000013237 I
SPI1 Taeniopygia guttata ENSTGUG00000010422 I
spi1b Takifugu rubripes ENSTRUG00000017273 I
spic Takifugu rubripes ENSTRUG00000011424 I
spi1b Tetraodon nigroviridis ENSTNIG00000009407 I
spic Tetraodon nigroviridis ENSTNIG00000000056 I
TC007077 Tribolium castaneum TC007077 I
TriadG17503 Trichoplax adhaerens TriadG17503 I
SPI1 Tursiops truncatus ENSTTRG00000014153 I
Tal_R006659 Tyto alba Tal_R006659 I
spib.S Xenopus laevis XB-GENE-6255533 I
spib.L Xenopus laevis XB-GENE-865287 I
spib Xenopus tropicalis XB-GENE-479615 I
spi1 Xenopus tropicalis XB-GENE-1018247 I
ENSXMAG00000005531 Xiphophorus maculatus ENSXMAG00000005531 I
ENSXMAG00000018836 Xiphophorus maculatus ENSXMAG00000018836 I