Cucsa.307250 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.307250 T284509_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.909 1.000
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.909 1.000
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.909 1.000
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.909 0.978
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.909 0.978
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.891 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.891 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.891 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.795 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.795 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.795 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.307250.1 Myb 24 69

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_198669 Agaricus bisporus AGABI2DRAFT_198669 I
BOTBODRAFT_358406 Botryobasidium botryosum BOTBODRAFT_358406 N
CC1G_08281 Coprinopsis cinerea CC1G_08281 I
GALMADRAFT_709408 Galerina marginata GALMADRAFT_709408 N
GALMADRAFT_924624 Galerina marginata GALMADRAFT_924624 N
GALMADRAFT_710225 Galerina marginata GALMADRAFT_710225 N
GALMADRAFT_56038 Galerina marginata GALMADRAFT_56038 N
GALMADRAFT_439371 Galerina marginata GALMADRAFT_439371 N
GALMADRAFT_439138 Galerina marginata GALMADRAFT_439138 N
GALMADRAFT_39494 Galerina marginata GALMADRAFT_39494 N
GALMADRAFT_238545 Galerina marginata GALMADRAFT_238545 N
GALMADRAFT_118766 Galerina marginata GALMADRAFT_118766 I
GALMADRAFT_1170770 Galerina marginata GALMADRAFT_1170770 N
GLOTRDRAFT_119791 Gloeophyllum trabeum GLOTRDRAFT_119791 I
M413DRAFT_446777 Hebeloma cylindrosporum M413DRAFT_446777 I
HETIRDRAFT_380701 Heterobasidion irregulare HETIRDRAFT_380701 N
JAAARDRAFT_55946 Jaapia argillacea JAAARDRAFT_55946 I
K443DRAFT_103561 Laccaria amethystina K443DRAFT_103561 N
LACBIDRAFT_300067 Laccaria bicolor LACBIDRAFT_300067 I
MPER_08472 Moniliophthora perniciosa MPER_08472 N
Moror_15941 Moniliophthora roreri Moror_15941 N
HPODL_02729 Ogataea parapolymorpha HPODL_02729 I
PAXRUDRAFT_831203 Paxillus rubicundulus PAXRUDRAFT_831203 I
PHACADRAFT_119777 Phanerochaete carnosa PHACADRAFT_119777 I
gww2.5.554.1 Phanerochaete chrysosporium gww2.5.554.1 N
PHLGIDRAFT_123599 Phlebiopsis gigantea PHLGIDRAFT_123599 I
PILCRDRAFT_82281 Piloderma croceum PILCRDRAFT_82281 N
PIIN_00347 Piriformospora indica PIIN_00347 N
M404DRAFT_42467 Pisolithus tinctorius M404DRAFT_42467 I
M404DRAFT_143892 Pisolithus tinctorius M404DRAFT_143892 I
PLEOSDRAFT_1087686 Pleurotus ostreatus PLEOSDRAFT_1087686 I
POSPLDRAFT_38710 Postia placenta POSPLDRAFT_38710 N
V565_131540 Rhizoctonia solani V565_131540 I
SCHCODRAFT_65208 Schizophyllum commune SCHCODRAFT_65208 I
M408DRAFT_138020 Serendipita vermifera M408DRAFT_138020 I
SETTUDRAFT_91900 Setosphaeria turcica SETTUDRAFT_91900 N
CY34DRAFT_809035 Suillus luteus CY34DRAFT_809035 I
BN946_scf184843.g9 Trametes cinnabarina BN946_scf184843.g9 I