CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_2000439
(
Phanerochaete chrysosporium
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.C_scaffold_2000439
T284877_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_2000439
Myb
414
458
QGRWMPAEDENLRDAVAQLGQQWEKISERVGRTASDCRDRWRNHL
fgenesh1_pg.C_scaffold_2000439
Myb
466
522
TGHWTKEEEEELTKIVTELTVLQGKDMDNDIFWGAVSQRMGGRRGRQQCRIKWYTFR
Links
Other
Myb/SANT
family TFs
Other
Phanerochaete chrysosporium
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_602360.1
Arabidopsis lyrata
scaffold_602360.1
I
scaffold_303767.1
Arabidopsis lyrata
scaffold_303767.1
I
AT2G18490
Arabidopsis thaliana
AT2G18490
I
AT5G22990
Arabidopsis thaliana
AT5G22990
D
AT5G42640
Arabidopsis thaliana
AT5G42640
I
AT2G15740
Arabidopsis thaliana
AT2G15740
D
Bostr.18351s0050
Boechera stricta
Bostr.18351s0050
I
Bostr.10199s0147
Boechera stricta
Bostr.10199s0147
I
Bo9g147060
Brassica oleracea
Bo9g147060
I
Bo7g010020
Brassica oleracea
Bo7g010020
I
Bra039606
Brassica rapa
Bra039606
I
Cagra.2968s0004
Capsella grandiflora
Cagra.2968s0004
I
Cagra.3954s0034
Capsella grandiflora
Cagra.3954s0034
I
Cagra.6034s0007
Capsella grandiflora
Cagra.6034s0007
I
Carubv10002800m.g
Capsella rubella
Carubv10002800m.g
I
Carubv10015875m.g
Capsella rubella
Carubv10015875m.g
I
Carubv10016477m.g
Capsella rubella
Carubv10016477m.g
I
Carubv10025077m.g
Capsella rubella
Carubv10025077m.g
I
Carubv10027554m.g
Capsella rubella
Carubv10027554m.g
I
Thhalv10015522m.g
Eutrema salsugineum
Thhalv10015522m.g
I
Thhalv10023174m.g
Eutrema salsugineum
Thhalv10023174m.g
I