CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.0612s0070
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.0612s0070
T285976_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0612s0070.1.p
Myb
258
306
KGGWTEELELALQGAYLTVKPSPNFWKKVAKMVPGKSAQECFDKVNSAL
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000002136
Astyanax mexicanus
ENSAMXG00000002136
N
ENSGACG00000000501
Gasterosteus aculeatus
ENSGACG00000000501
N
ENSONIG00000014734
Oreochromis niloticus
ENSONIG00000014734
N
phf20b
Oryzias latipes
ENSORLG00000018975
N
ENSPFOG00000006230
Poecilia formosa
ENSPFOG00000006230
N
phf20b
Takifugu rubripes
ENSTRUG00000009645
N
ENSXMAG00000008821
Xiphophorus maculatus
ENSXMAG00000008821
N