Carubv10003097m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10003097m.g T286231_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.755 0.766
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.669 0.681
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.669 0.681
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.667 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003097m Myb 16 67

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

346 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KGM_17270 Danaus plexippus KGM_17270 N
YQE_00101 Dendroctonus ponderosae YQE_00101 I
GF21452 Drosophila ananassae FBgn0098453 I
ase Drosophila erecta FBgn0043711 I
GH24345 Drosophila grimshawi FBgn0131801 I
ase Drosophila melanogaster FBgn0000137 D
GA17007 Drosophila pseudoobscura FBgn0077021 I
GD16504 Drosophila simulans FBgn0188111 I
GJ15598 Drosophila virilis FBgn0202788 N
GK25272 Drosophila willistoni FBgn0227231 I
ase Drosophila yakuba FBgn0022827 I
HHAL003290-PA Halyomorpha halys HHAL003290-PA I
LDEC003645 Leptinotarsa decemlineata LDEC003645 I
LCUP011238 Lucilia cuprina LCUP011238 I
RPRC001627 Rhodnius prolixus RPRC001627 I
TC008433 Tribolium castaneum TC008433 I
L798_10211 Zootermopsis nevadensis L798_10211 I