CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10016801m.g
(
Capsella rubella
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Carubv10016801m.g
T286359_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10016801m
Myb
51
104
SQVWGTWDELVLACAVKRHAFTDWDSVAKEVQARSRSSLIVSAVNCRLKYQDLK
Links
Other
Myb/SANT
family TFs
Other
Capsella rubella
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0000801101
Schistosoma curassoni
SCUD_0000801101
N
B_00103
Schistosoma haematobium
B_00103
N
B_00253
Schistosoma haematobium
B_00253
N
Smp_019460
Schistosoma mansoni
Smp_019460
N
Smp_132810
Schistosoma mansoni
Smp_132810
N
SMRZ_0000573101
Schistosoma margrebowiei
SMRZ_0000573101
N
SMRZ_0001657601
Schistosoma margrebowiei
SMRZ_0001657601
N
SMTD_0000355101
Schistosoma mattheei
SMTD_0000355101
N
SROB_0000219001
Schistosoma rodhaini
SROB_0000219001
N
TRE_0000147201
Trichobilharzia regenti
TRE_0000147201
N
TRE_0000161101
Trichobilharzia regenti
TRE_0000161101
N