Carubv10023692m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10023692m.g T286424_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.884 0.978
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.884 0.978
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.845 0.946
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.838 0.925
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.773 0.839
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.773 0.839
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.773 0.839
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.714 0.796
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.714 0.796
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.714 0.796
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.714 0.796
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.714 0.796
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.694 0.763
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.680 0.763
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.671 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023692m Myb 14 60
Carubv10023692m Myb 66 111

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

313 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05384.1 Alternaria brassicicola AB05384.1 I
AOL_s00097g585 Arthrobotrys oligospora AOL_s00097g585 I
ARB_02172 Arthroderma benhamiae ARB_02172 I
MCYG_00012 Arthroderma otae MCYG_00012 I
e_gw1.00042.98.1 Aspergillus carbonarius e_gw1.00042.98.1 I
ACLA_019130 Aspergillus clavatus CADACLAG00002921 I
CADAFLAG00001090 Aspergillus flavus CADAFLAG00001090 I
AFUA_1G16460 Aspergillus fumigatus CADAFUAG00007656 I
ANIA_00951 Aspergillus nidulans CADANIAG00001701 D
CADANGAG00001076 Aspergillus niger CADANGAG00001076 I
EURHEDRAFT_512193 Aspergillus ruber EURHEDRAFT_512193 I
ATEG_05161 Aspergillus terreus CADATEAG00004745 I
M437DRAFT_37789 Aureobasidium melanogenum M437DRAFT_37789 I
M438DRAFT_349765 Aureobasidium pullulans M438DRAFT_349765 I
AUEXF2481DRAFT_6481 Aureobasidium subglaciale AUEXF2481DRAFT_6481 I
COCC4DRAFT_52892 Bipolaris maydis COCC4DRAFT_52892 I
COCMIDRAFT_22848 Bipolaris oryzae COCMIDRAFT_22848 I
COCSADRAFT_34697 Bipolaris sorokiniana COCSADRAFT_34697 I
COCVIDRAFT_24689 Bipolaris victoriae COCVIDRAFT_24689 I
COCCADRAFT_202 Bipolaris zeicola COCCADRAFT_202 I
BDDG_03512 Blastomyces dermatitidis BDDG_03512 I
BGHDH14_bgh02790 Blumeria graminis BGHDH14_bgh02790 I
Bcin03g00750 Botrytis cinerea Bcin03g00750 I
PVAR5_7895 Byssochlamys spectabilis PVAR5_7895 I
A1O5_10470 Cladophialophora psammophila A1O5_10470 I
CPUR_06646 Claviceps purpurea CPUR_06646 I
CIMG_13671 Coccidioides immitis CIMG_13671 I
CPC735_010880 Coccidioides posadasii CPC735_010880 I
estExt_fgenesh1_pg.C_80141 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_80141 I
CFIO01_07721 Colletotrichum fioriniae CFIO01_07721 I
CGGC5_4259 Colletotrichum gloeosporioides CGGC5_4259 I
GLRG_10296 Colletotrichum graminicola GLRG_10296 I
Cob_11342 Colletotrichum orbiculare Cob_11342 I
CSUB01_10111 Colletotrichum sublineola CSUB01_10111 I
estExt_Genewise1Plus.C_21231 Cryphonectria parasitica estExt_Genewise1Plus.C_21231 I
HMPREF1541_00486 Cyphellophora europaea HMPREF1541_00486 I
H072_2778 Dactylellina haptotyla H072_2778 I
A1O9_06736 Exophiala aquamarina A1O9_06736 I
PV10_00861 Exophiala mesophila PV10_00861 I
PV06_04889 Exophiala oligosperma PV06_04889 I
PV11_03612 Exophiala sideris PV11_03612 I
PV08_03184 Exophiala spinifera PV08_03184 I
PV05_07253 Exophiala xenobiotica PV05_07253 I
FFUJ_01766 Fusarium fujikuroi FFUJ_01766 I
FGRRES_01555 Fusarium graminearum FGRRES_01555 I
FOXG_11153 Fusarium oxysporum FOXG_11153 I
FPSE_00779 Fusarium pseudograminearum FPSE_00779 I
NechaG65174 Fusarium solani NechaG65174 I
FVEG_09636 Fusarium verticillioides FVEG_09636 I
GGTG_06418 Gaeumannomyces graminis GGTG_06418 I
M7I_0147 Glarea lozoyensis M7I_0147 I
CMQ_6538 Grosmannia clavigera CMQ_6538 I
HCBG_01276 Histoplasma capsulatum HCBG_01276 I
LEMA_P086810.1 Leptosphaeria maculans LEMA_P086810.1 I
MPH_10251 Macrophomina phaseolina MPH_10251 I
MGG_03288 Magnaporthe oryzae MGG_03288 I
MAPG_04630 Magnaporthe poae MAPG_04630 I
MBM_01879 Marssonina brunnea MBM_01879 I
MAM_04081 Metarhizium album MAM_04081 I
MBR_06810 Metarhizium brunneum MBR_06810 I
MGU_04555 Metarhizium guizhouense MGU_04555 I
MAJ_06048 Metarhizium majus MAJ_06048 I
X797_000031 Metarhizium robertsii X797_000031 I
MCYG_00012 Microsporum canis MCYG_00012 I
MGYG_07213 Microsporum gypseum MGYG_07213 I
estExt_fgeneshMC_kg.C_70068 Mucor circinelloides estExt_fgeneshMC_kg.C_70068 N
fgeneshMC_pg.4_#_1012 Mucor circinelloides fgeneshMC_pg.4_#_1012 N
estExt_fgenesh1_pg.C_chr_20607 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_20607 I
estExt_Genewise1Plus.C_sca_8_chr1_1_00454 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00454 I
UCRNP2_8340 Neofusicoccum parvum UCRNP2_8340 I
NFIA_008980 Neosartorya fischeri CADNFIAG00001347 I
OIDMADRAFT_183172 Oidiodendron maius OIDMADRAFT_183172 I
OCS_04625 Ophiocordyceps sinensis OCS_04625 I
F503_00378 Ophiostoma piceae uamh F503_00378 I
PABG_06099 Paracoccidioides brasiliensis PABG_06099 I
PAAG_12580 Paracoccidioides sp lutzii PAAG_12580 I
Pc21g23040 Penicillium chrysogenum Pc21g23040 I
PDIP_11330 Penicillium digitatum PDIP_11330 I
PEX1_102500 Penicillium expansum PEX1_102500 I
PITC_032250 Penicillium italicum PITC_032250 I
PMAA_066500 Penicillium marneffei PMAA_066500 I
PDE_00114 Penicillium oxalicum PDE_00114 I
PCH_Pc21g23040 Penicillium rubens PCH_Pc21g23040 I
U727_00433202531 Penicillium solitum U727_00433202531 I
PFICI_09118 Pestalotiopsis fici PFICI_09118 I
SNOG_02426 Phaeosphaeria nodorum SNOG_02426 I
PODANS_3_9690 Podospora anserina PODANS_3_9690 I
GMDG_00083 Pseudogymnoascus destructans GMDG_00083 I
V499_07882 Pseudogymnoascus pannorum V499_07882 I
PTT_17883 Pyrenophora teres PTT_17883 I
SAPIO_CDS1137 Scedosporium apiospermum SAPIO_CDS1137 I
SBOR_3479 Sclerotinia borealis SBOR_3479 I
SS1G_00829 Sclerotinia sclerotiorum SS1G_00829 I
SETTUDRAFT_163914 Setosphaeria turcica SETTUDRAFT_163914 I
SPBR_00337 Sporothrix brasiliensis SPBR_00337 I
HMPREF1624_07934 Sporothrix schenckii HMPREF1624_07934 I
S40288_02068 Stachybotrys chartarum S40288_02068 I
S40285_02659 Stachybotrys chlorohalonata S40285_02659 I
SNOG_02426 Stagonospora nodorum SNOG_02426 I
PMAA_066500 Talaromyces marneffei PMAA_066500 I
TSTA_086630 Talaromyces stipitatus TSTA_086630 I
UCRPA7_8182 Togninia minima UCRPA7_8182 I
TRIATDRAFT_141284 Trichoderma atroviride TRIATDRAFT_141284 I
TRIREDRAFT_22532 Trichoderma reesei TRIREDRAFT_22532 I
TRIVIDRAFT_2765 Trichoderma virens TRIVIDRAFT_2765 I
TEQG_08786 Trichophyton equinum TEQG_08786 I
H101_07555 Trichophyton interdigitale H101_07555 I
H102_00527 Trichophyton rubrum H102_00527 I
H105_00515 Trichophyton soudanense H105_00515 I
TRV_00423 Trichophyton verrucosum TRV_00423 I
GSTUM_00008508001 Tuber melanosporum GSTUM_00008508001 I
UREG_02910 Uncinocarpus reesii UREG_02910 I
UV8b_475 Ustilaginoidea virens UV8b_475 I
PV09_04179 Verruconis gallopava PV09_04179 I
VDBG_05782 Verticillium albo atrum VDBG_05782 I
VDBG_05782 Verticillium alfalfae VDBG_05782 I
VDAG_07716 Verticillium dahliae VDAG_07716 I
Mycgr3G108163 Zymoseptoria tritici Mycgr3G108163 I