CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw2.14.322.1
(
Micromonas sp RCC299
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
e_gw2.14.322.1
T286700_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.09.00.361.1
M01288_2.00
Ostreococcus tauri
AACGGHHHND
HNDDDCCGTT
PBM
Lambert et al.(2019)
pTH9820
0.666
0.807
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
88104
Myb
11
57
KGGWTPDEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVL
88104
Myb
63
109
KGPWTKEEDDKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHL
88104
Myb
115
160
REEWSREEDRKLIIAHHQFGNRWAEIAKTFVGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Micromonas sp RCC299
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00109p00061950
Amborella trichopoda
AMTR_s00109p00061950
I
0.714
e_gw1.85.52.1
Bigelowiella natans
e_gw1.85.52.1
N
0.675
e_gw1.3.910.1
Micromonas pusilla
e_gw1.3.910.1
N
0.692
OSTLU_34891
Ostreococcus lucimarinus
OSTLU_34891
I
0.701
e_gw1.09.00.361.1
Ostreococcus tauri
e_gw1.09.00.361.1
D
0.666