CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Eucgr.K00153 *(Eucalyptus grandis)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Eucgr.K00153	T286967_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK21166.1 M01281_2.00	Cannabis sativa	HACCWAMY	RKTWGGTD	PBM Lambert et al.(2019) pTH11255	0.798	0.871
MYB43 M07127_2.00	Arabidopsis thaliana	NYYYACCWAMYWH	DWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB43_col_a	0.737	0.817
MYB99 M07151_2.00	Arabidopsis thaliana	NYYYACCWAMYHH	DDRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB99_col_a	0.724	0.796
MYB99 M07152_2.00	Arabidopsis thaliana	YHYACCTAMYH	DRKTAGGTRDR	Dap-seq OMalley et al.(2016) MYB99_colamp_a	0.724	0.796
MYB83 M01073_2.00	Arabidopsis thaliana	YACCHACC	GGTDGGTR	PBM Sullivan et al.(2014) pTH7140	0.672	0.613
MYB83 M07066_2.00	Arabidopsis thaliana	YCACCAACHNH	DNDGTTGGTGR	Dap-seq OMalley et al.(2016) MYB83_col_a	0.672	0.613
MYB83 M07067_2.00	Arabidopsis thaliana	NCACCWAMCDNHNNN	NNNDNHGKTWGGTGN	Dap-seq OMalley et al.(2016) MYB83_colamp_a	0.672	0.613
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Eucgr.K00153.1	Myb	14	61	KGPWTAEEDRKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL
Eucgr.K00153.1	Myb	67	112	RGLLNEAEESLVIDLHATLGNRWSKIAARLPGRTDNEIKNHWNTHI
Eucgr.K00153.2	Myb	14	61	KGPWTAEEDRKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL
Eucgr.K00153.2	Myb	67	112	RGLLNEAEESLVIDLHATLGNRWSKIAARLPGRTDNEIKNHWNTHI

Links
Other Myb/SANT family TFs
Other *Eucalyptus grandis* TFs