CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

evm.TU.supercontig_1097.3 *(Carica papaya)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	evm.TU.supercontig_1097.3	T287033_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AtMYB40 M07126_2.00	Arabidopsis thaliana	YYYACCWAMYHHH	DDDRKTWGGTRRR	Dap-seq OMalley et al.(2016) MYB40_col_a	0.760	0.860
MYB43 M07127_2.00	Arabidopsis thaliana	NYYYACCWAMYWH	DWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB43_col_a	0.708	0.774
PK21166.1 M01281_2.00	Cannabis sativa	HACCWAMY	RKTWGGTD	PBM Lambert et al.(2019) pTH11255	0.667	0.763
MYB99 M07151_2.00	Arabidopsis thaliana	NYYYACCWAMYHH	DDRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB99_col_a	0.663	0.688
MYB99 M07152_2.00	Arabidopsis thaliana	YHYACCTAMYH	DRKTAGGTRDR	Dap-seq OMalley et al.(2016) MYB99_colamp_a	0.663	0.688
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
evm.model.supercontig_1097.3	Myb	14	61	RGPWTIEEDHKLMNFILNNGIQCWRTVPKLAGLLRCGKSCRLRWINYL
evm.model.supercontig_1097.3	Myb	67	112	RGGFMESEENQIIELHSRLGNRWSKIASHFPGRTDNEIKNHWNTRI

Links
Other Myb/SANT family TFs
Other *Carica papaya* TFs